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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170829868
MDSZ01016108
273217
Betaproteobacteria
ACG
Arg
>WENV170834220
MDSZ01093943
274063
Betaproteobacteria
ACG
Arg
>WENV170842267
MDSZ01237074
274063
Betaproteobacteria
ACG
Arg
>WENV170843175
MDSZ01255494
274398
Betaproteobacteria
CAT
Met
>WENV170843561
MDSZ01262559
452713
Betaproteobacteria
GAA
Phe
>WENV170840725
MDSZ01209831
8301
Betaproteobacteria
GCT
Ser
>WENV170829862
MDSZ01016108
30459
Betaproteobacteria
GGA
Ser
>WENV170830829
MDSZ01033685
179981
Betaproteobacteria
TAG
Leu
>WENV170838814
MDSZ01174924
780573
Betaproteobacteria
TCC
Gly
>WENV170836526
MDSZ01133092
788678
Betaproteobacteria
TCC
Gly
>WENV170836643
MDSZ01135173
274221
Betaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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