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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
77 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170856784
MDTB01000302
454504
Alphaproteobacteria
CAT
Met
>WENV170856809
MDTB01000551
274224
Alphaproteobacteria
CAT
Met
>WENV170857536
MDTB01010283
454318
Alphaproteobacteria
GGC
Ala
>WENV170857919
MDTB01015384
780582
Alphaproteobacteria
TCC
Gly
>WENV170858175
MDTB01018591
20317
Alphaproteobacteria
GCT
Ser
>WENV170858810
MDTB01027474
281026
Alphaproteobacteria
CAT
Met
>WENV170859182
MDTB01032577
655167
Alphaproteobacteria
TTC
Glu
>WENV170859197
MDTB01032747
277700
Alphaproteobacteria
GTG
His
>WENV170859588
MDTB01038281
46044
Alphaproteobacteria
TGA
Ser
>WENV170859714
MDTB01040226
452884
Alphaproteobacteria
CCA
Trp
>WENV170859871
MDTB01042730
655361
Alphaproteobacteria
GCC
Gly
>WENV170860078
MDTB01045715
180720
Alphaproteobacteria
TAG
Leu
>WENV170860434
MDTB01050894
452884
Alphaproteobacteria
CCA
Trp
>WENV170860498
MDTB01051732
656140
Alphaproteobacteria
GAC
Val
>WENV170861025
MDTB01058739
452884
Alphaproteobacteria
CCA
Trp
>WENV170861459
MDTB01064719
180489
Alphaproteobacteria
TAG
Leu
>WENV170861534
MDTB01065794
780331
Alphaproteobacteria
TCC
Gly
>WENV170861533
MDTB01065794
655363
Alphaproteobacteria
GGT
Thr
>WENV170861581
MDTB01066492
452895
Alphaproteobacteria
TGC
Ala
>WENV170862220
MDTB01074789
656140
Alphaproteobacteria
GAC
Val
>WENV170862991
MDTB01084898
46190
Alphaproteobacteria
GGA
Ser
>WENV170863005
MDTB01085141
451759
Alphaproteobacteria
TTT
Lys
>WENV170863087
MDTB01086436
273450
Alphaproteobacteria
TCT
Arg
>WENV170863527
MDTB01092260
780582
Alphaproteobacteria
TCC
Gly
>WENV170863687
MDTB01094600
655271
Alphaproteobacteria
GGT
Thr
>WENV170864072
MDTB01100405
656140
Alphaproteobacteria
GAC
Val
>WENV170864685
MDTB01108948
274224
Alphaproteobacteria
CAT
Met
>WENV170865010
MDTB01113495
275989
Alphaproteobacteria
CAT
Met
>WENV170865016
MDTB01113546
455289
Alphaproteobacteria
TTT
Lys
>WENV170865015
MDTB01113546
31090
Alphaproteobacteria
GGA
Ser
>WENV170865350
MDTB01118331
454059
Alphaproteobacteria
TTT
Lys
>WENV170865419
MDTB01119150
270796
Alphaproteobacteria
GTC
Asp
>WENV170865589
MDTB01121304
112802
Alphaproteobacteria
GAG
Leu
>WENV170865612
MDTB01121734
270798
Alphaproteobacteria
CGG
Pro
>WENV170865676
MDTB01122454
271956
Alphaproteobacteria
CAT
Met
>WENV170865989
MDTB01127088
452884
Alphaproteobacteria
CCA
Trp
>WENV170866334
MDTB01131567
653534
Alphaproteobacteria
GCC
Gly
>WENV170866393
MDTB01132501
780582
Alphaproteobacteria
TCC
Gly
>WENV170866988
MDTB01140195
656140
Alphaproteobacteria
GAC
Val
>WENV170867079
MDTB01141440
455172
Alphaproteobacteria
GGC
Ala
>WENV170867128
MDTB01142116
452884
Alphaproteobacteria
CCA
Trp
>WENV170867289
MDTB01144575
274224
Alphaproteobacteria
CAT
Met
>WENV170867288
MDTB01144575
273451
Alphaproteobacteria
GTG
His
>WENV170867803
MDTB01151887
451759
Alphaproteobacteria
TTT
Lys
>WENV170867853
MDTB01152559
455360
Alphaproteobacteria
CGC
Ala
>WENV170867912
MDTB01153456
452884
Alphaproteobacteria
CCA
Trp
>WENV170867991
MDTB01154941
655271
Alphaproteobacteria
GGT
Thr
>WENV170868306
MDTB01159598
653532
Alphaproteobacteria
GTT
Asn
>WENV170868495
MDTB01162651
655358
Alphaproteobacteria
TTG
Gln
>WENV170868992
MDTB01170174
454059
Alphaproteobacteria
TTT
Lys
>WENV170869240
MDTB01173140
112802
Alphaproteobacteria
GAG
Leu
>WENV170869322
MDTB01174364
655271
Alphaproteobacteria
GGT
Thr
>WENV170869725
MDTB01180919
452884
Alphaproteobacteria
CCA
Trp
>WENV170869831
MDTB01182921
454059
Alphaproteobacteria
TTT
Lys
>WENV170869988
MDTB01184692
474526
Alphaproteobacteria
TAC
Val
>WENV170869991
MDTB01184752
273803
Alphaproteobacteria
CCT
Arg
>WENV170870124
MDTB01187260
656001
Alphaproteobacteria
GCC
Gly
>WENV170870179
MDTB01188013
273603
Alphaproteobacteria
TGG
Pro
>WENV170870568
MDTB01193720
653532
Alphaproteobacteria
GTT
Asn
>WENV170870833
MDTB01198203
218220
Alphaproteobacteria
>WENV170870925
MDTB01199394
218220
Alphaproteobacteria
>WENV170870990
MDTB01200147
281029
Alphaproteobacteria
GGG
Pro
>WENV170870992
MDTB01200147
454433
Alphaproteobacteria
TGT
Thr
>WENV170871027
MDTB01200581
273603
Alphaproteobacteria
TGG
Pro
>WENV170871370
MDTB01204769
275828
Alphaproteobacteria
GTC
Asp
>WENV170871418
MDTB01205405
780346
Alphaproteobacteria
CTG
Gln
>WENV170871419
MDTB01205405
780039
Alphaproteobacteria
GCA
Cys
>WENV170871581
MDTB01207557
454059
Alphaproteobacteria
TTT
Lys
>WENV170871588
MDTB01207672
655363
Alphaproteobacteria
GGT
Thr
>WENV170871629
MDTB01208338
452884
Alphaproteobacteria
CCA
Trp
>WENV170871630
MDTB01208340
653532
Alphaproteobacteria
GTT
Asn
>WENV170872313
MDTB01216782
780582
Alphaproteobacteria
TCC
Gly
>WENV170872345
MDTB01217174
273603
Alphaproteobacteria
TGG
Pro
>WENV170873348
MDTB01230970
112802
Alphaproteobacteria
GAG
Leu
>WENV170873876
MDTB01238447
454059
Alphaproteobacteria
TTT
Lys
>WENV170874198
MDTB01243079
454059
Alphaproteobacteria
TTT
Lys
>WENV170874213
MDTB01243362
658305
Alphaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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