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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
72 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170903554
MDTE01000198
454059
Alphaproteobacteria
TTT
Lys
>WENV170903604
MDTE01000532
653532
Alphaproteobacteria
GTT
Asn
>WENV170904242
MDTE01009553
180561
Alphaproteobacteria
TAG
Leu
>WENV170904348
MDTE01010952
780346
Alphaproteobacteria
CTG
Gln
>WENV170904349
MDTE01010952
780039
Alphaproteobacteria
GCA
Cys
>WENV170904542
MDTE01013343
112839
Alphaproteobacteria
CAG
Leu
>WENV170905162
MDTE01021787
454318
Alphaproteobacteria
GGC
Ala
>WENV170905496
MDTE01026089
454318
Alphaproteobacteria
GGC
Ala
>WENV170905701
MDTE01028946
46086
Alphaproteobacteria
CGA
Ser
>WENV170906131
MDTE01034467
455172
Alphaproteobacteria
GGC
Ala
>WENV170906188
MDTE01035270
30553
Alphaproteobacteria
GGA
Ser
>WENV170906342
MDTE01037366
655392
Alphaproteobacteria
GAC
Val
>WENV170906425
MDTE01038451
112839
Alphaproteobacteria
CAG
Leu
>WENV170906557
MDTE01040365
20317
Alphaproteobacteria
GCT
Ser
>WENV170906688
MDTE01042068
46035
Alphaproteobacteria
GGA
Ser
>WENV170906980
MDTE01046279
273603
Alphaproteobacteria
TGG
Pro
>WENV170906998
MDTE01046519
273803
Alphaproteobacteria
CCT
Arg
>WENV170907094
MDTE01047707
454318
Alphaproteobacteria
GGC
Ala
>WENV170907355
MDTE01050868
780331
Alphaproteobacteria
TCC
Gly
>WENV170907619
MDTE01054019
30553
Alphaproteobacteria
GGA
Ser
>WENV170907717
MDTE01055654
273450
Alphaproteobacteria
TCT
Arg
>WENV170907804
MDTE01056725
270799
Alphaproteobacteria
CAT
Met
>WENV170908036
MDTE01059827
270799
Alphaproteobacteria
CAT
Met
>WENV170908060
MDTE01060113
274141
Alphaproteobacteria
CCT
Arg
>WENV170908489
MDTE01065224
779596
Alphaproteobacteria
TCC
Gly
>WENV170908493
MDTE01065280
455289
Alphaproteobacteria
TTT
Lys
>WENV170908492
MDTE01065280
31090
Alphaproteobacteria
GGA
Ser
>WENV170909527
MDTE01079451
655365
Alphaproteobacteria
TTC
Glu
>WENV170909667
MDTE01081237
455172
Alphaproteobacteria
GGC
Ala
>WENV170909670
MDTE01081298
281026
Alphaproteobacteria
CAT
Met
>WENV170909676
MDTE01081298
274224
Alphaproteobacteria
CAT
Met
>WENV170909675
MDTE01081298
273451
Alphaproteobacteria
GTG
His
>WENV170909672
MDTE01081298
455360
Alphaproteobacteria
CGC
Ala
>WENV170909677
MDTE01081298
281029
Alphaproteobacteria
GGG
Pro
>WENV170909679
MDTE01081298
454433
Alphaproteobacteria
TGT
Thr
>WENV170909951
MDTE01085170
321511
Alphaproteobacteria
CAT
Met
>WENV170910354
MDTE01090830
274138
Alphaproteobacteria
CAT
Met
>WENV170910984
MDTE01099270
281027
Alphaproteobacteria
CCT
Arg
>WENV170911314
MDTE01103960
653532
Alphaproteobacteria
GTT
Asn
>WENV170911315
MDTE01103983
274224
Alphaproteobacteria
CAT
Met
>WENV170911523
MDTE01107328
270799
Alphaproteobacteria
CAT
Met
>WENV170912254
MDTE01117891
655363
Alphaproteobacteria
GGT
Thr
>WENV170912575
MDTE01122795
780346
Alphaproteobacteria
CTG
Gln
>WENV170912688
MDTE01124210
180561
Alphaproteobacteria
TAG
Leu
>WENV170912703
MDTE01124409
780331
Alphaproteobacteria
TCC
Gly
>WENV170912702
MDTE01124409
655363
Alphaproteobacteria
GGT
Thr
>WENV170912974
MDTE01128348
20317
Alphaproteobacteria
GCT
Ser
>WENV170913060
MDTE01129357
46044
Alphaproteobacteria
TGA
Ser
>WENV170913065
MDTE01129357
454504
Alphaproteobacteria
CAT
Met
>WENV170913195
MDTE01131044
656140
Alphaproteobacteria
GAC
Val
>WENV170913394
MDTE01133978
780039
Alphaproteobacteria
GCA
Cys
>WENV170914446
MDTE01148652
19999
Alphaproteobacteria
GCT
Ser
>WENV170914655
MDTE01151540
454510
Alphaproteobacteria
CGT
Thr
>WENV170915005
MDTE01156895
112839
Alphaproteobacteria
CAG
Leu
>WENV170915070
MDTE01157777
274144
Alphaproteobacteria
GTG
His
>WENV170915314
MDTE01161663
455289
Alphaproteobacteria
TTT
Lys
>WENV170915462
MDTE01164158
655392
Alphaproteobacteria
GAC
Val
>WENV170915551
MDTE01165410
274224
Alphaproteobacteria
CAT
Met
>WENV170915722
MDTE01168107
655392
Alphaproteobacteria
GAC
Val
>WENV170915911
MDTE01170552
655361
Alphaproteobacteria
GCC
Gly
>WENV170916239
MDTE01175377
274138
Alphaproteobacteria
CAT
Met
>WENV170916371
MDTE01177147
655365
Alphaproteobacteria
TTC
Glu
>WENV170916372
MDTE01177147
655365
Alphaproteobacteria
TTC
Glu
>WENV170916520
MDTE01179119
474526
Alphaproteobacteria
TAC
Val
>WENV170916553
MDTE01179749
270799
Alphaproteobacteria
CAT
Met
>WENV170916858
MDTE01184053
455360
Alphaproteobacteria
CGC
Ala
>WENV170916923
MDTE01185063
273450
Alphaproteobacteria
TCT
Arg
>WENV170917527
MDTE01193849
454510
Alphaproteobacteria
CGT
Thr
>WENV170917526
MDTE01193849
780039
Alphaproteobacteria
GCA
Cys
>WENV170918009
MDTE01200871
47329
Alphaproteobacteria
TGA
Ser
>WENV170918086
MDTE01201698
780582
Alphaproteobacteria
TCC
Gly
>WENV170918136
MDTE01202421
655363
Alphaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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