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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170947670
MEHZ010855112
277700
Alphaproteobacteria
GTG
His
>WENV170947703
MEHZ010887414
653813
Alphaproteobacteria
GAC
Val
>WENV170948402
MEHZ011182856
46222
Alphaproteobacteria
GGA
Ser
>WENV170948441
MEHZ011194521
653534
Alphaproteobacteria
GCC
Gly
>WENV170948489
MEHZ011210868
653537
Alphaproteobacteria
GGT
Thr
>WENV170948910
MEHZ011310333
451742
Alphaproteobacteria
GGC
Ala
>WENV170949009
MEHZ011336838
281955
Alphaproteobacteria
CAT
Met
>WENV170949131
MEHZ011364740
218137
Alphaproteobacteria
TAG
Leu
>WENV170949748
MEHZ011449514
452884
Alphaproteobacteria
CCA
Trp
>WENV170949846
MEHZ011457534
452884
Alphaproteobacteria
CCA
Trp
>WENV170949845
MEHZ011457534
656001
Alphaproteobacteria
GCC
Gly
>WENV170949887
MEHZ011462150
274225
Alphaproteobacteria
CAT
Met
>WENV170949950
MEHZ011466321
452917
Alphaproteobacteria
TAC
Val
>WENV170950007
MEHZ011470274
273797
Alphaproteobacteria
GGG
Pro
>WENV170950062
MEHZ011473932
656001
Alphaproteobacteria
GCC
Gly
>WENV170950069
MEHZ011474678
653532
Alphaproteobacteria
GTT
Asn
>WENV170950259
MEHZ011487533
273797
Alphaproteobacteria
GGG
Pro
>WENV170950272
MEHZ011487992
656001
Alphaproteobacteria
GCC
Gly
>WENV170950278
MEHZ011488068
452884
Alphaproteobacteria
CCA
Trp
>WENV170950288
MEHZ011488500
653532
Alphaproteobacteria
GTT
Asn
>WENV170950450
MEHZ011497656
656001
Alphaproteobacteria
GCC
Gly
>WENV170950525
MEHZ011501751
271956
Alphaproteobacteria
CAT
Met
>WENV170950806
MEHZ011518789
218119
Alphaproteobacteria
>WENV170950828
MEHZ011520489
275157
Alphaproteobacteria
TGG
Pro
>WENV170950893
MEHZ011524823
180720
Alphaproteobacteria
TAG
Leu
>WENV170950920
MEHZ011527453
275157
Alphaproteobacteria
TGG
Pro
>WENV170950988
MEHZ011530558
653532
Alphaproteobacteria
GTT
Asn
>WENV170951028
MEHZ011532449
275157
Alphaproteobacteria
TGG
Pro
>WENV170951075
MEHZ011535473
653532
Alphaproteobacteria
GTT
Asn
>WENV170951103
MEHZ011536671
656001
Alphaproteobacteria
GCC
Gly
>WENV170951165
MEHZ011539696
275157
Alphaproteobacteria
TGG
Pro
>WENV170951336
MEHZ011548921
271956
Alphaproteobacteria
CAT
Met
>WENV170951499
MEHZ011556625
273797
Alphaproteobacteria
GGG
Pro
>WENV170951591
MEHZ011560484
653532
Alphaproteobacteria
GTT
Asn
>WENV170951653
MEHZ011562889
274133
Alphaproteobacteria
ACG
Arg
>WENV170951738
MEHZ011567198
452917
Alphaproteobacteria
TAC
Val
>WENV170952016
MEHZ011580626
271956
Alphaproteobacteria
CAT
Met
>WENV170952165
MEHZ011586677
452895
Alphaproteobacteria
TGC
Ala
>WENV170952436
MEHZ011597641
653532
Alphaproteobacteria
GTT
Asn
>WENV170952589
MEHZ011605564
653532
Alphaproteobacteria
GTT
Asn
>WENV170952926
MEHZ011621059
275157
Alphaproteobacteria
TGG
Pro
>WENV170952949
MEHZ011622267
780582
Alphaproteobacteria
TCC
Gly
>WENV170953092
MEHZ011628533
287552
Alphaproteobacteria
GAT
Ile
>WENV170953645
MEHZ011657411
779596
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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