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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170948240
MEHZ011123665
452701
Betaproteobacteria
CCA
Trp
>WENV170948821
MEHZ011288299
274063
Betaproteobacteria
ACG
Arg
>WENV170949241
MEHZ011383970
465376
Betaproteobacteria
GAA
Phe
>WENV170949589
MEHZ011434477
457602
Betaproteobacteria
TGT
Thr
>WENV170949591
MEHZ011434485
457602
Betaproteobacteria
TGT
Thr
>WENV170951752
MEHZ011567841
274221
Betaproteobacteria
TGG
Pro
>WENV170952038
MEHZ011581422
274221
Betaproteobacteria
TGG
Pro
>WENV170952140
MEHZ011585229
274221
Betaproteobacteria
TGG
Pro
>WENV170949282
MEHZ011392874
454348
Betaproteobacteria
GAA
Phe
>WENV170952734
MEHZ011611936
274722
Betaproteobacteria
GAT
Ile
>WENV170949677
MEHZ011444375
274722
Betaproteobacteria
GAT
Ile
>WENV170947647
MEHZ010822806
452706
Betaproteobacteria
CAT
Met
>WENV170953884
MEHZ011668676
780079
Betaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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