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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170948363
MEHZ011162127
452908
Gammaproteobacteria
TTT
Lys
>WENV170948738
MEHZ011271767
275457
Gammaproteobacteria
ACG
Arg
>WENV170949244
MEHZ011385011
457459
Gammaproteobacteria
GGC
Ala
>WENV170949362
MEHZ011406874
276185
Gammaproteobacteria
TGG
Pro
>WENV170949696
MEHZ011445265
474520
Gammaproteobacteria
CCA
Trp
>WENV170949788
MEHZ011452822
459731
Gammaproteobacteria
GGT
Thr
>WENV170949824
MEHZ011456285
456511
Gammaproteobacteria
GAA
Phe
>WENV170950015
MEHZ011470721
454397
Gammaproteobacteria
TGT
Thr
>WENV170950149
MEHZ011480759
455942
Gammaproteobacteria
GCC
Gly
>WENV170950159
MEHZ011481240
270982
Gammaproteobacteria
GAT
Ile
>WENV170950436
MEHZ011496986
456511
Gammaproteobacteria
GAA
Phe
>WENV170950464
MEHZ011498296
781219
Gammaproteobacteria
GCA
Cys
>WENV170950536
MEHZ011502496
271464
Gammaproteobacteria
TGG
Pro
>WENV170950610
MEHZ011506036
271464
Gammaproteobacteria
TGG
Pro
>WENV170950727
MEHZ011513934
284535
Gammaproteobacteria
CCG
Arg
>WENV170950740
MEHZ011514845
454397
Gammaproteobacteria
TGT
Thr
>WENV170950767
MEHZ011516421
271464
Gammaproteobacteria
TGG
Pro
>WENV170950807
MEHZ011518795
270982
Gammaproteobacteria
GAT
Ile
>WENV170950818
MEHZ011520124
271464
Gammaproteobacteria
TGG
Pro
>WENV170950892
MEHZ011524719
284535
Gammaproteobacteria
CCG
Arg
>WENV170950915
MEHZ011526937
271464
Gammaproteobacteria
TGG
Pro
>WENV170951137
MEHZ011538693
274775
Gammaproteobacteria
GAC
Val
>WENV170951170
MEHZ011539845
271464
Gammaproteobacteria
TGG
Pro
>WENV170951181
MEHZ011540547
455942
Gammaproteobacteria
GCC
Gly
>WENV170951317
MEHZ011548055
471158
Gammaproteobacteria
TTC
Glu
>WENV170951319
MEHZ011548124
271464
Gammaproteobacteria
TGG
Pro
>WENV170951326
MEHZ011548464
455942
Gammaproteobacteria
GCC
Gly
>WENV170951624
MEHZ011561629
459731
Gammaproteobacteria
GGT
Thr
>WENV170951854
MEHZ011572932
270982
Gammaproteobacteria
GAT
Ile
>WENV170951870
MEHZ011573965
781219
Gammaproteobacteria
GCA
Cys
>WENV170951888
MEHZ011575178
781219
Gammaproteobacteria
GCA
Cys
>WENV170951929
MEHZ011577025
459731
Gammaproteobacteria
GGT
Thr
>WENV170951947
MEHZ011577563
272023
Gammaproteobacteria
GAT
Ile
>WENV170951998
MEHZ011579672
455942
Gammaproteobacteria
GCC
Gly
>WENV170951999
MEHZ011579672
781219
Gammaproteobacteria
GCA
Cys
>WENV170952205
MEHZ011588520
454397
Gammaproteobacteria
TGT
Thr
>WENV170952280
MEHZ011591271
454397
Gammaproteobacteria
TGT
Thr
>WENV170952305
MEHZ011592116
270982
Gammaproteobacteria
GAT
Ile
>WENV170952345
MEHZ011593657
277966
Gammaproteobacteria
CAT
Met
>WENV170952841
MEHZ011617375
474520
Gammaproteobacteria
CCA
Trp
>WENV170952840
MEHZ011617375
459731
Gammaproteobacteria
GGT
Thr
>WENV170952837
MEHZ011617375
454397
Gammaproteobacteria
TGT
Thr
>WENV170952869
MEHZ011618633
270982
Gammaproteobacteria
GAT
Ile
>WENV170953200
MEHZ011633523
466510
Gammaproteobacteria
GCC
Gly
>WENV170953363
MEHZ011641552
270982
Gammaproteobacteria
GAT
Ile
>WENV170953705
MEHZ011660321
459731
Gammaproteobacteria
GGT
Thr
>WENV170953702
MEHZ011660321
454397
Gammaproteobacteria
TGT
Thr
>WENV170953852
MEHZ011667171
270982
Gammaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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