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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170961334
MLJW01000008
273289
Betaproteobacteria
CAT
Met
>WENV170961335
MLJW01000008
457606
Betaproteobacteria
TTT
Lys
>WENV170961376
MLJW01000020
457606
Betaproteobacteria
TTT
Lys
>WENV170961382
MLJW01000021
119929
Betaproteobacteria
CAG
Leu
>WENV170961383
MLJW01000021
274221
Betaproteobacteria
TGG
Pro
>WENV170961384
MLJW01000021
271693
Betaproteobacteria
TCT
Arg
>WENV170961387
MLJW01000021
274063
Betaproteobacteria
ACG
Arg
>WENV170961402
MLJW01000026
282859
Betaproteobacteria
TGG
Pro
>WENV170961403
MLJW01000026
271693
Betaproteobacteria
TCT
Arg
>WENV170961413
MLJW01000029
454348
Betaproteobacteria
GAA
Phe
>WENV170961450
MLJW01000047
273289
Betaproteobacteria
CAT
Met
>WENV170961451
MLJW01000047
457606
Betaproteobacteria
TTT
Lys
>WENV170961457
MLJW01000054
179980
Betaproteobacteria
GTA
Tyr
>WENV170961463
MLJW01000056
465310
Betaproteobacteria
TGC
Ala
>WENV170961465
MLJW01000057
457105
Betaproteobacteria
TAC
Val
>WENV170961475
MLJW01000065
452595
Betaproteobacteria
GTT
Asn
>WENV170961478
MLJW01000067
454348
Betaproteobacteria
GAA
Phe
>WENV170961486
MLJW01000077
273289
Betaproteobacteria
CAT
Met
>WENV170961495
MLJW01000090
465080
Betaproteobacteria
GGC
Ala
>WENV170961561
MLJW01000152
271693
Betaproteobacteria
TCT
Arg
>WENV170961583
MLJW01000182
655530
Betaproteobacteria
GGT
Thr
>WENV170961588
MLJW01000192
282859
Betaproteobacteria
TGG
Pro
>WENV170961589
MLJW01000192
271693
Betaproteobacteria
TCT
Arg
>WENV170961655
MLJW01000360
455351
Betaproteobacteria
TAC
Val
>WENV170961666
MLJW01000403
283584
Betaproteobacteria
CAT
Met
>WENV170961703
MLJW01000583
275880
Betaproteobacteria
GAT
Ile
>WENV170961746
MLJW01000844
454252
Betaproteobacteria
CGC
Ala
>WENV170961759
MLJW01001005
271893
Betaproteobacteria
GGG
Pro
>WENV170961774
MLJW01001192
455936
Betaproteobacteria
CCA
Trp
>WENV170961810
MLJW01001664
655629
Betaproteobacteria
CAC
Val
>WENV170961826
MLJW01002048
508704
Betaproteobacteria
GAA
Phe
>WENV170961846
MLJW01002549
286012
Betaproteobacteria
CAT
Met
>WENV170961858
MLJW01002873
667715
Betaproteobacteria
CAC
Val
>WENV170961875
MLJW01003761
273483
Betaproteobacteria
ACG
Arg
>WENV170961876
MLJW01004125
464315
Betaproteobacteria
GTT
Asn
>WENV170961877
MLJW01004181
271893
Betaproteobacteria
GGG
Pro
>WENV170961881
MLJW01004361
454902
Betaproteobacteria
CGC
Ala
>WENV170961893
MLJW01005253
179980
Betaproteobacteria
GTA
Tyr
>WENV170961916
MLJW01006657
271596
Betaproteobacteria
GAT
Ile
>WENV170961917
MLJW01006657
471312
Betaproteobacteria
TGC
Ala
>WENV170961924
MLJW01007314
273481
Betaproteobacteria
GGG
Pro
>WENV170961936
MLJW01008579
454453
Betaproteobacteria
GCC
Gly
>WENV170961937
MLJW01008579
454453
Betaproteobacteria
GCC
Gly
>WENV170961942
MLJW01009260
180624
Betaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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