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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180086193
MPMD02434438
284350
Gammaproteobacteria
TCT
Arg
>WENV180086347
MPMD02457359
272023
Gammaproteobacteria
GAT
Ile
>WENV180086640
MPMD02496755
272023
Gammaproteobacteria
GAT
Ile
>WENV180083588
MPMD02081206
272104
Gammaproteobacteria
CGG
Pro
>WENV180086549
MPMD02482594
273327
Gammaproteobacteria
ACG
Arg
>WENV180083463
MPMD02064629
451732
Gammaproteobacteria
GCC
Gly
>WENV180084122
MPMD02149339
451732
Gammaproteobacteria
GCC
Gly
>WENV180084572
MPMD02211620
451732
Gammaproteobacteria
GCC
Gly
>WENV180086561
MPMD02484509
451732
Gammaproteobacteria
GCC
Gly
>WENV180085864
MPMD02382973
458525
Gammaproteobacteria
TAC
Val
>WENV180083333
MPMD02044048
779459
Gammaproteobacteria
CCA
Trp
>WENV180086348
MPMD02457359
466186
Gammaproteobacteria
TGC
Ala
>WENV180085163
MPMD02289549
466186
Gammaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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