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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170962391
MRWF01014646
46309
Alphaproteobacteria
GGA
Ser
>WENV170962739
MRWF01025267
273797
Alphaproteobacteria
GGG
Pro
>WENV170962735
MRWF01025265
452917
Alphaproteobacteria
TAC
Val
>WENV170961995
MRWF01001369
655167
Alphaproteobacteria
TTC
Glu
>WENV170961996
MRWF01001369
655167
Alphaproteobacteria
TTC
Glu
>WENV170962877
MRWF01029236
655421
Alphaproteobacteria
GGT
Thr
>WENV170962005
MRWF01001990
457318
Alphaproteobacteria
CGT
Thr
>WENV170962070
MRWF01004863
273805
Alphaproteobacteria
ACG
Arg
>WENV170962673
MRWF01023240
273805
Alphaproteobacteria
ACG
Arg
>WENV170962953
MRWF01031332
273805
Alphaproteobacteria
ACG
Arg
>WENV170962239
MRWF01009914
655225
Alphaproteobacteria
TTG
Gln
>WENV170961981
MRWF01000702
273452
Alphaproteobacteria
CAT
Met
>WENV170962833
MRWF01028218
30705
Alphaproteobacteria
GCT
Ser
>WENV170962006
MRWF01001990
112803
Alphaproteobacteria
CAG
Leu
>WENV170962119
MRWF01006506
112803
Alphaproteobacteria
CAG
Leu
>WENV170962691
MRWF01023974
112803
Alphaproteobacteria
CAG
Leu
>WENV170962344
MRWF01012709
276122
Alphaproteobacteria
ACG
Arg
>WENV170962218
MRWF01009190
655623
Alphaproteobacteria
GCC
Gly
>WENV170962219
MRWF01009190
655623
Alphaproteobacteria
GCC
Gly
>WENV170962220
MRWF01009190
655623
Alphaproteobacteria
GCC
Gly
>WENV170962799
MRWF01027302
273799
Alphaproteobacteria
CCG
Arg
>WENV170962221
MRWF01009190
218119
Alphaproteobacteria
>WENV170962717
MRWF01024622
456410
Alphaproteobacteria
CGT
Thr
>WENV170962733
MRWF01025259
46035
Alphaproteobacteria
GGA
Ser
>WENV170962954
MRWF01031332
655171
Alphaproteobacteria
GGT
Thr
>WENV170962970
MRWF01031865
468172
Alphaproteobacteria
TGC
Ala
>WENV170962452
MRWF01016068
281319
Alphaproteobacteria
CAT
Met
>WENV170962822
MRWF01027889
281319
Alphaproteobacteria
CAT
Met
>WENV170962593
MRWF01021153
277700
Alphaproteobacteria
GTG
His
>WENV170962533
MRWF01019435
452895
Alphaproteobacteria
TGC
Ala
>WENV170962719
MRWF01024630
456496
Alphaproteobacteria
GAA
Phe
>WENV170962891
MRWF01029631
656305
Alphaproteobacteria
CAC
Val
>WENV170962946
MRWF01031326
452894
Alphaproteobacteria
CCA
Trp
>WENV170962138
MRWF01007102
653532
Alphaproteobacteria
GTT
Asn
>WENV170962139
MRWF01007102
653532
Alphaproteobacteria
GTT
Asn
>WENV170962316
MRWF01011701
653581
Alphaproteobacteria
GCC
Gly
>WENV170961989
MRWF01001184
452624
Alphaproteobacteria
CGT
Thr
>WENV170962057
MRWF01004539
452624
Alphaproteobacteria
CGT
Thr
>WENV170962430
MRWF01015659
275909
Alphaproteobacteria
CCA
Trp
>WENV170962345
MRWF01012709
301178
Alphaproteobacteria
GTG
His
>WENV170962076
MRWF01005190
655566
Alphaproteobacteria
GAC
Val
>WENV170962985
MRWF01032067
779636
Alphaproteobacteria
CTG
Gln
>WENV170962779
MRWF01026618
274223
Alphaproteobacteria
CCG
Arg
>WENV170962537
MRWF01019923
113188
Alphaproteobacteria
GAG
Leu
>WENV170961954
MRWF01000020
180720
Alphaproteobacteria
TAG
Leu
>WENV170962438
MRWF01016058
287552
Alphaproteobacteria
GAT
Ile
>WENV170962103
MRWF01005950
180729
Alphaproteobacteria
CAG
Leu
>WENV170961993
MRWF01001367
113204
Alphaproteobacteria
GAG
Leu
>WENV170962709
MRWF01024495
780327
Alphaproteobacteria
GCA
Cys
>WENV170962734
MRWF01025265
655166
Alphaproteobacteria
CAC
Val
>WENV170962120
MRWF01006507
46191
Alphaproteobacteria
TGA
Ser
>WENV170962775
MRWF01026618
113228
Alphaproteobacteria
CAG
Leu
>WENV170962690
MRWF01023974
273803
Alphaproteobacteria
CCT
Arg
>WENV170962334
MRWF01012462
275157
Alphaproteobacteria
TGG
Pro
>WENV170962797
MRWF01027302
275157
Alphaproteobacteria
TGG
Pro
>WENV170962736
MRWF01025265
270796
Alphaproteobacteria
GTC
Asp
>WENV170962737
MRWF01025265
270796
Alphaproteobacteria
GTC
Asp
>WENV170962738
MRWF01025265
270796
Alphaproteobacteria
GTC
Asp
>WENV170962095
MRWF01005866
654681
Alphaproteobacteria
GCC
Gly
>WENV170962548
MRWF01020180
654681
Alphaproteobacteria
GCC
Gly
>WENV170962001
MRWF01001634
654998
Alphaproteobacteria
GCC
Gly
>WENV170962389
MRWF01014589
455436
Alphaproteobacteria
TTC
Glu
>WENV170962543
MRWF01020006
455436
Alphaproteobacteria
TTC
Glu
>WENV170962988
MRWF01032067
455436
Alphaproteobacteria
TTC
Glu
>WENV170962144
MRWF01007106
454912
Alphaproteobacteria
GGC
Ala
>WENV170962909
MRWF01030208
656140
Alphaproteobacteria
GAC
Val
>WENV170962343
MRWF01012708
780582
Alphaproteobacteria
TCC
Gly
>WENV170962159
MRWF01007750
454914
Alphaproteobacteria
TTT
Lys
>WENV170962689
MRWF01023974
454914
Alphaproteobacteria
TTT
Lys
>WENV170962137
MRWF01007102
456412
Alphaproteobacteria
CAT
Met
>WENV170962798
MRWF01027302
46034
Alphaproteobacteria
CGA
Ser
>WENV170962952
MRWF01031332
654103
Alphaproteobacteria
GAA
Phe
>WENV170962740
MRWF01025270
659578
Alphaproteobacteria
GAC
Val
>WENV170962393
MRWF01014705
779596
Alphaproteobacteria
TCC
Gly
>WENV170962064
MRWF01004600
658005
Alphaproteobacteria
GCC
Gly
>WENV170962401
MRWF01014803
304024
Alphaproteobacteria
GAT
Ile
>WENV170962404
MRWF01014803
304024
Alphaproteobacteria
GAT
Ile
>WENV170962534
MRWF01019435
304024
Alphaproteobacteria
GAT
Ile
>WENV170962102
MRWF01005919
654995
Alphaproteobacteria
TTG
Gln
>WENV170962904
MRWF01029975
654995
Alphaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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