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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
90 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170961951
MRWF01000008
779604
Gammaproteobacteria
GCA
Cys
>WENV170961950
MRWF01000008
452412
Gammaproteobacteria
GCC
Gly
>WENV170961960
MRWF01000443
275465
Gammaproteobacteria
GAC
Val
>WENV170961997
MRWF01001374
270982
Gammaproteobacteria
GAT
Ile
>WENV170962004
MRWF01001987
30354
Gammaproteobacteria
TGA
Ser
>WENV170962011
MRWF01002037
457453
Gammaproteobacteria
TTT
Lys
>WENV170962016
MRWF01002534
452415
Gammaproteobacteria
GTG
His
>WENV170962015
MRWF01002534
275462
Gammaproteobacteria
TCT
Arg
>WENV170962023
MRWF01002762
779604
Gammaproteobacteria
GCA
Cys
>WENV170962022
MRWF01002762
452412
Gammaproteobacteria
GCC
Gly
>WENV170962047
MRWF01003929
112371
Gammaproteobacteria
CAA
Leu
>WENV170962061
MRWF01004578
271200
Gammaproteobacteria
CAT
Met
>WENV170962067
MRWF01004675
452412
Gammaproteobacteria
GCC
Gly
>WENV170962068
MRWF01004675
452414
Gammaproteobacteria
TTC
Glu
>WENV170962071
MRWF01004871
271464
Gammaproteobacteria
TGG
Pro
>WENV170962072
MRWF01004871
302461
Gammaproteobacteria
TCT
Arg
>WENV170962085
MRWF01005700
456709
Gammaproteobacteria
TGC
Ala
>WENV170962092
MRWF01005865
271458
Gammaproteobacteria
GGG
Pro
>WENV170962106
MRWF01006108
271458
Gammaproteobacteria
GGG
Pro
>WENV170962110
MRWF01006499
271458
Gammaproteobacteria
GGG
Pro
>WENV170962134
MRWF01007096
271254
Gammaproteobacteria
CAT
Met
>WENV170962153
MRWF01007436
451982
Gammaproteobacteria
GGC
Ala
>WENV170962154
MRWF01007436
459479
Gammaproteobacteria
TTC
Glu
>WENV170962157
MRWF01007562
452416
Gammaproteobacteria
TTT
Lys
>WENV170962232
MRWF01009874
30354
Gammaproteobacteria
TGA
Ser
>WENV170962242
MRWF01009941
271456
Gammaproteobacteria
ACG
Arg
>WENV170962243
MRWF01009941
271456
Gammaproteobacteria
ACG
Arg
>WENV170962252
MRWF01010604
653834
Gammaproteobacteria
TCC
Gly
>WENV170962250
MRWF01010604
452404
Gammaproteobacteria
TGT
Thr
>WENV170962251
MRWF01010604
184132
Gammaproteobacteria
GTA
Tyr
>WENV170962260
MRWF01010642
271254
Gammaproteobacteria
CAT
Met
>WENV170962282
MRWF01010953
271464
Gammaproteobacteria
TGG
Pro
>WENV170962283
MRWF01010953
302461
Gammaproteobacteria
TCT
Arg
>WENV170962287
MRWF01011066
452414
Gammaproteobacteria
TTC
Glu
>WENV170962294
MRWF01011390
271464
Gammaproteobacteria
TGG
Pro
>WENV170962295
MRWF01011390
302461
Gammaproteobacteria
TCT
Arg
>WENV170962299
MRWF01011396
271254
Gammaproteobacteria
CAT
Met
>WENV170962318
MRWF01011912
779604
Gammaproteobacteria
GCA
Cys
>WENV170962317
MRWF01011912
452412
Gammaproteobacteria
GCC
Gly
>WENV170962332
MRWF01012416
46215
Gammaproteobacteria
GCT
Ser
>WENV170962333
MRWF01012416
271456
Gammaproteobacteria
ACG
Arg
>WENV170962337
MRWF01012478
452410
Gammaproteobacteria
TAC
Val
>WENV170962335
MRWF01012478
452410
Gammaproteobacteria
TAC
Val
>WENV170962341
MRWF01012706
464809
Gammaproteobacteria
GAA
Phe
>WENV170962348
MRWF01012728
452412
Gammaproteobacteria
GCC
Gly
>WENV170962347
MRWF01012728
452414
Gammaproteobacteria
TTC
Glu
>WENV170962365
MRWF01013442
282413
Gammaproteobacteria
ACG
Arg
>WENV170962368
MRWF01013676
271600
Gammaproteobacteria
GAT
Ile
>WENV170962373
MRWF01013676
459731
Gammaproteobacteria
GGT
Thr
>WENV170962383
MRWF01014110
459479
Gammaproteobacteria
TTC
Glu
>WENV170962425
MRWF01015428
464809
Gammaproteobacteria
GAA
Phe
>WENV170962510
MRWF01018703
271460
Gammaproteobacteria
CGG
Pro
>WENV170962521
MRWF01019170
464809
Gammaproteobacteria
GAA
Phe
>WENV170962549
MRWF01020237
46215
Gammaproteobacteria
GCT
Ser
>WENV170962550
MRWF01020237
271456
Gammaproteobacteria
ACG
Arg
>WENV170962552
MRWF01020528
276185
Gammaproteobacteria
TGG
Pro
>WENV170962563
MRWF01020530
454826
Gammaproteobacteria
TAC
Val
>WENV170962568
MRWF01020569
271460
Gammaproteobacteria
CGG
Pro
>WENV170962571
MRWF01020961
270982
Gammaproteobacteria
GAT
Ile
>WENV170962585
MRWF01021148
451982
Gammaproteobacteria
GGC
Ala
>WENV170962587
MRWF01021148
276185
Gammaproteobacteria
TGG
Pro
>WENV170962586
MRWF01021148
459479
Gammaproteobacteria
TTC
Glu
>WENV170962583
MRWF01021148
453897
Gammaproteobacteria
TAC
Val
>WENV170962602
MRWF01021365
271200
Gammaproteobacteria
CAT
Met
>WENV170962608
MRWF01021808
275465
Gammaproteobacteria
GAC
Val
>WENV170962618
MRWF01021839
453897
Gammaproteobacteria
TAC
Val
>WENV170962621
MRWF01021844
457453
Gammaproteobacteria
TTT
Lys
>WENV170962636
MRWF01022501
271459
Gammaproteobacteria
CCT
Arg
>WENV170962665
MRWF01023096
271459
Gammaproteobacteria
CCT
Arg
>WENV170962671
MRWF01023238
452412
Gammaproteobacteria
GCC
Gly
>WENV170962672
MRWF01023238
452414
Gammaproteobacteria
TTC
Glu
>WENV170962686
MRWF01023628
452414
Gammaproteobacteria
TTC
Glu
>WENV170962695
MRWF01023987
275465
Gammaproteobacteria
GAC
Val
>WENV170962704
MRWF01024008
271200
Gammaproteobacteria
CAT
Met
>WENV170962729
MRWF01025256
452410
Gammaproteobacteria
TAC
Val
>WENV170962727
MRWF01025256
452410
Gammaproteobacteria
TAC
Val
>WENV170962731
MRWF01025257
453897
Gammaproteobacteria
TAC
Val
>WENV170962757
MRWF01025689
271459
Gammaproteobacteria
CCT
Arg
>WENV170962758
MRWF01025735
452410
Gammaproteobacteria
TAC
Val
>WENV170962760
MRWF01025735
452410
Gammaproteobacteria
TAC
Val
>WENV170962768
MRWF01025970
464809
Gammaproteobacteria
GAA
Phe
>WENV170962786
MRWF01026626
459731
Gammaproteobacteria
GGT
Thr
>WENV170962805
MRWF01027313
271252
Gammaproteobacteria
CAT
Met
>WENV170962811
MRWF01027322
454392
Gammaproteobacteria
TTT
Lys
>WENV170962838
MRWF01028450
30354
Gammaproteobacteria
TGA
Ser
>WENV170962863
MRWF01028589
270982
Gammaproteobacteria
GAT
Ile
>WENV170962868
MRWF01028594
464809
Gammaproteobacteria
GAA
Phe
>WENV170962894
MRWF01029802
452416
Gammaproteobacteria
TTT
Lys
>WENV170962893
MRWF01029802
452416
Gammaproteobacteria
TTT
Lys
>WENV170962971
MRWF01031993
275465
Gammaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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