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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
115 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170963954
MRWG01001593
218595
Alphaproteobacteria
CAA
Leu
>WENV170964787
MRWG01043691
46309
Alphaproteobacteria
GGA
Ser
>WENV170964788
MRWG01043697
46309
Alphaproteobacteria
GGA
Ser
>WENV170963031
MRWG01000004
273797
Alphaproteobacteria
GGG
Pro
>WENV170963861
MRWG01001034
273797
Alphaproteobacteria
GGG
Pro
>WENV170963033
MRWG01000004
452917
Alphaproteobacteria
TAC
Val
>WENV170963353
MRWG01000123
655167
Alphaproteobacteria
TTC
Glu
>WENV170963354
MRWG01000123
655167
Alphaproteobacteria
TTC
Glu
>WENV170963696
MRWG01000524
655167
Alphaproteobacteria
TTC
Glu
>WENV170963780
MRWG01000749
655421
Alphaproteobacteria
GGT
Thr
>WENV170964304
MRWG01007575
655421
Alphaproteobacteria
GGT
Thr
>WENV170964913
MRWG01072223
655421
Alphaproteobacteria
GGT
Thr
>WENV170964932
MRWG01079398
655421
Alphaproteobacteria
GGT
Thr
>WENV170963327
MRWG01000104
457318
Alphaproteobacteria
CGT
Thr
>WENV170963888
MRWG01001182
273805
Alphaproteobacteria
ACG
Arg
>WENV170964967
MRWG01090242
273805
Alphaproteobacteria
ACG
Arg
>WENV170964969
MRWG01090311
273805
Alphaproteobacteria
ACG
Arg
>WENV170963553
MRWG01000285
655225
Alphaproteobacteria
TTG
Gln
>WENV170963891
MRWG01001197
273452
Alphaproteobacteria
CAT
Met
>WENV170964262
MRWG01006251
273452
Alphaproteobacteria
CAT
Met
>WENV170963236
MRWG01000056
30705
Alphaproteobacteria
GCT
Ser
>WENV170963402
MRWG01000159
112803
Alphaproteobacteria
CAG
Leu
>WENV170964011
MRWG01001935
276122
Alphaproteobacteria
ACG
Arg
>WENV170964865
MRWG01062013
276122
Alphaproteobacteria
ACG
Arg
>WENV170964866
MRWG01062034
276122
Alphaproteobacteria
ACG
Arg
>WENV170963375
MRWG01000140
655623
Alphaproteobacteria
GCC
Gly
>WENV170963376
MRWG01000140
655623
Alphaproteobacteria
GCC
Gly
>WENV170963377
MRWG01000140
655623
Alphaproteobacteria
GCC
Gly
>WENV170963026
MRWG01000004
273799
Alphaproteobacteria
CCG
Arg
>WENV170964235
MRWG01005610
655270
Alphaproteobacteria
GAA
Phe
>WENV170963378
MRWG01000140
218119
Alphaproteobacteria
>WENV170964846
MRWG01057732
456410
Alphaproteobacteria
CGT
Thr
>WENV170963037
MRWG01000004
46035
Alphaproteobacteria
GGA
Ser
>WENV170963730
MRWG01000606
655171
Alphaproteobacteria
GGT
Thr
>WENV170964571
MRWG01019589
468172
Alphaproteobacteria
TGC
Ala
>WENV170963728
MRWG01000603
281319
Alphaproteobacteria
CAT
Met
>WENV170964922
MRWG01075229
281319
Alphaproteobacteria
CAT
Met
>WENV170963352
MRWG01000123
277700
Alphaproteobacteria
GTG
His
>WENV170964397
MRWG01009955
452895
Alphaproteobacteria
TGC
Ala
>WENV170964583
MRWG01020984
452895
Alphaproteobacteria
TGC
Ala
>WENV170963815
MRWG01000851
456496
Alphaproteobacteria
GAA
Phe
>WENV170964394
MRWG01009888
456496
Alphaproteobacteria
GAA
Phe
>WENV170964449
MRWG01012515
456496
Alphaproteobacteria
GAA
Phe
>WENV170964761
MRWG01040405
656305
Alphaproteobacteria
CAC
Val
>WENV170964767
MRWG01040803
656305
Alphaproteobacteria
CAC
Val
>WENV170963587
MRWG01000327
456891
Alphaproteobacteria
CGT
Thr
>WENV170963856
MRWG01001000
452894
Alphaproteobacteria
CCA
Trp
>WENV170964019
MRWG01002061
452894
Alphaproteobacteria
CCA
Trp
>WENV170964471
MRWG01013833
451742
Alphaproteobacteria
GGC
Ala
>WENV170963029
MRWG01000004
653532
Alphaproteobacteria
GTT
Asn
>WENV170963030
MRWG01000004
653532
Alphaproteobacteria
GTT
Asn
>WENV170964013
MRWG01001946
653532
Alphaproteobacteria
GTT
Asn
>WENV170963160
MRWG01000024
653581
Alphaproteobacteria
GCC
Gly
>WENV170964323
MRWG01008091
452624
Alphaproteobacteria
CGT
Thr
>WENV170964577
MRWG01020652
452624
Alphaproteobacteria
CGT
Thr
>WENV170963283
MRWG01000074
275909
Alphaproteobacteria
CCA
Trp
>WENV170963914
MRWG01001352
301178
Alphaproteobacteria
GTG
His
>WENV170963180
MRWG01000030
655566
Alphaproteobacteria
GAC
Val
>WENV170963719
MRWG01000590
655566
Alphaproteobacteria
GAC
Val
>WENV170963630
MRWG01000402
273801
Alphaproteobacteria
GTG
His
>WENV170963905
MRWG01001292
779636
Alphaproteobacteria
CTG
Gln
>WENV170964144
MRWG01003739
779636
Alphaproteobacteria
CTG
Gln
>WENV170963014
MRWG01000002
274223
Alphaproteobacteria
CCG
Arg
>WENV170963629
MRWG01000401
463649
Alphaproteobacteria
GAA
Phe
>WENV170963069
MRWG01000007
113188
Alphaproteobacteria
GAG
Leu
>WENV170963506
MRWG01000241
113188
Alphaproteobacteria
GAG
Leu
>WENV170963258
MRWG01000066
180720
Alphaproteobacteria
TAG
Leu
>WENV170964443
MRWG01012181
287552
Alphaproteobacteria
GAT
Ile
>WENV170963774
MRWG01000729
180729
Alphaproteobacteria
CAG
Leu
>WENV170963896
MRWG01001232
180729
Alphaproteobacteria
CAG
Leu
>WENV170964946
MRWG01084895
180729
Alphaproteobacteria
CAG
Leu
>WENV170963531
MRWG01000270
113204
Alphaproteobacteria
GAG
Leu
>WENV170963521
MRWG01000255
780327
Alphaproteobacteria
GCA
Cys
>WENV170963032
MRWG01000004
655166
Alphaproteobacteria
CAC
Val
>WENV170963351
MRWG01000123
46191
Alphaproteobacteria
TGA
Ser
>WENV170963008
MRWG01000002
113228
Alphaproteobacteria
CAG
Leu
>WENV170963401
MRWG01000159
273803
Alphaproteobacteria
CCT
Arg
>WENV170963672
MRWG01000481
273803
Alphaproteobacteria
CCT
Arg
>WENV170963024
MRWG01000004
275157
Alphaproteobacteria
TGG
Pro
>WENV170963830
MRWG01000901
275157
Alphaproteobacteria
TGG
Pro
>WENV170963034
MRWG01000004
270796
Alphaproteobacteria
GTC
Asp
>WENV170963035
MRWG01000004
270796
Alphaproteobacteria
GTC
Asp
>WENV170963036
MRWG01000004
270796
Alphaproteobacteria
GTC
Asp
>WENV170963873
MRWG01001095
271632
Alphaproteobacteria
TCT
Arg
>WENV170963555
MRWG01000286
46262
Alphaproteobacteria
CGA
Ser
>WENV170964219
MRWG01005116
654681
Alphaproteobacteria
GCC
Gly
>WENV170964883
MRWG01063979
654998
Alphaproteobacteria
GCC
Gly
>WENV170964884
MRWG01064043
654998
Alphaproteobacteria
GCC
Gly
>WENV170963720
MRWG01000590
455436
Alphaproteobacteria
TTC
Glu
>WENV170963918
MRWG01001361
455436
Alphaproteobacteria
TTC
Glu
>WENV170964079
MRWG01002737
455436
Alphaproteobacteria
TTC
Glu
>WENV170964313
MRWG01007918
455436
Alphaproteobacteria
TTC
Glu
>WENV170964317
MRWG01007971
455436
Alphaproteobacteria
TTC
Glu
>WENV170963229
MRWG01000050
454912
Alphaproteobacteria
GGC
Ala
>WENV170963457
MRWG01000199
656140
Alphaproteobacteria
GAC
Val
>WENV170964075
MRWG01002682
656140
Alphaproteobacteria
GAC
Val
>WENV170963441
MRWG01000188
671670
Alphaproteobacteria
CAC
Val
>WENV170964431
MRWG01011294
112802
Alphaproteobacteria
GAG
Leu
>WENV170963288
MRWG01000077
780582
Alphaproteobacteria
TCC
Gly
>WENV170963400
MRWG01000159
454914
Alphaproteobacteria
TTT
Lys
>WENV170963645
MRWG01000419
454914
Alphaproteobacteria
TTT
Lys
>WENV170963028
MRWG01000004
456412
Alphaproteobacteria
CAT
Met
>WENV170963202
MRWG01000038
275152
Alphaproteobacteria
TCT
Arg
>WENV170963025
MRWG01000004
46034
Alphaproteobacteria
CGA
Ser
>WENV170963707
MRWG01000557
654103
Alphaproteobacteria
GAA
Phe
>WENV170963729
MRWG01000606
654103
Alphaproteobacteria
GAA
Phe
>WENV170963547
MRWG01000281
659578
Alphaproteobacteria
GAC
Val
>WENV170963271
MRWG01000070
779596
Alphaproteobacteria
TCC
Gly
>WENV170963495
MRWG01000234
658005
Alphaproteobacteria
GCC
Gly
>WENV170963512
MRWG01000244
301299
Alphaproteobacteria
CCG
Arg
>WENV170964398
MRWG01009955
304024
Alphaproteobacteria
GAT
Ile
>WENV170964357
MRWG01009009
304024
Alphaproteobacteria
GAT
Ile
>WENV170963159
MRWG01000023
654995
Alphaproteobacteria
TTG
Gln
>WENV170963447
MRWG01000192
654995
Alphaproteobacteria
TTG
Gln
>WENV170964821
MRWG01050131
654995
Alphaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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