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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
92 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170963476
MRWG01000209
275457
Gammaproteobacteria
ACG
Arg
>WENV170962998
MRWG01000001
779604
Gammaproteobacteria
GCA
Cys
>WENV170964368
MRWG01009202
779604
Gammaproteobacteria
GCA
Cys
>WENV170964815
MRWG01048997
779604
Gammaproteobacteria
GCA
Cys
>WENV170964935
MRWG01080852
779604
Gammaproteobacteria
GCA
Cys
>WENV170964940
MRWG01083341
779604
Gammaproteobacteria
GCA
Cys
>WENV170964941
MRWG01083380
779604
Gammaproteobacteria
GCA
Cys
>WENV170964947
MRWG01085036
779604
Gammaproteobacteria
GCA
Cys
>WENV170964948
MRWG01085075
779604
Gammaproteobacteria
GCA
Cys
>WENV170963714
MRWG01000575
457453
Gammaproteobacteria
TTT
Lys
>WENV170964097
MRWG01002977
457453
Gammaproteobacteria
TTT
Lys
>WENV170964450
MRWG01012603
457453
Gammaproteobacteria
TTT
Lys
>WENV170963961
MRWG01001619
275465
Gammaproteobacteria
GAC
Val
>WENV170964831
MRWG01053111
275465
Gammaproteobacteria
GAC
Val
>WENV170963640
MRWG01000414
271464
Gammaproteobacteria
TGG
Pro
>WENV170964027
MRWG01002141
271464
Gammaproteobacteria
TGG
Pro
>WENV170964067
MRWG01002642
271464
Gammaproteobacteria
TGG
Pro
>WENV170964525
MRWG01016140
271464
Gammaproteobacteria
TGG
Pro
>WENV170964069
MRWG01002642
452415
Gammaproteobacteria
GTG
His
>WENV170964848
MRWG01058515
270982
Gammaproteobacteria
GAT
Ile
>WENV170964744
MRWG01037633
270982
Gammaproteobacteria
GAT
Ile
>WENV170964589
MRWG01021414
270982
Gammaproteobacteria
GAT
Ile
>WENV170964549
MRWG01018046
270982
Gammaproteobacteria
GAT
Ile
>WENV170964500
MRWG01015242
270982
Gammaproteobacteria
GAT
Ile
>WENV170964392
MRWG01009845
270982
Gammaproteobacteria
GAT
Ile
>WENV170964476
MRWG01014096
270982
Gammaproteobacteria
GAT
Ile
>WENV170964610
MRWG01023321
653834
Gammaproteobacteria
TCC
Gly
>WENV170963340
MRWG01000112
271252
Gammaproteobacteria
CAT
Met
>WENV170964795
MRWG01045753
281115
Gammaproteobacteria
GAT
Ile
>WENV170963643
MRWG01000417
454392
Gammaproteobacteria
TTT
Lys
>WENV170963580
MRWG01000311
457171
Gammaproteobacteria
GTT
Asn
>WENV170963459
MRWG01000200
283252
Gammaproteobacteria
GTC
Asp
>WENV170963461
MRWG01000201
451982
Gammaproteobacteria
GGC
Ala
>WENV170964964
MRWG01089625
271458
Gammaproteobacteria
GGG
Pro
>WENV170964415
MRWG01010613
271458
Gammaproteobacteria
GGG
Pro
>WENV170963867
MRWG01001061
271458
Gammaproteobacteria
GGG
Pro
>WENV170963778
MRWG01000742
271458
Gammaproteobacteria
GGG
Pro
>WENV170964644
MRWG01026308
452416
Gammaproteobacteria
TTT
Lys
>WENV170964645
MRWG01026308
452416
Gammaproteobacteria
TTT
Lys
>WENV170964557
MRWG01019019
271254
Gammaproteobacteria
CAT
Met
>WENV170964972
MRWG01092333
271254
Gammaproteobacteria
CAT
Met
>WENV170964176
MRWG01004382
464809
Gammaproteobacteria
GAA
Phe
>WENV170963234
MRWG01000052
464809
Gammaproteobacteria
GAA
Phe
>WENV170964896
MRWG01067468
276185
Gammaproteobacteria
TGG
Pro
>WENV170964068
MRWG01002642
275462
Gammaproteobacteria
TCT
Arg
>WENV170963338
MRWG01000111
282413
Gammaproteobacteria
ACG
Arg
>WENV170964777
MRWG01042492
271600
Gammaproteobacteria
GAT
Ile
>WENV170964453
MRWG01013216
46215
Gammaproteobacteria
GCT
Ser
>WENV170962997
MRWG01000001
452412
Gammaproteobacteria
GCC
Gly
>WENV170964216
MRWG01005084
452412
Gammaproteobacteria
GCC
Gly
>WENV170964436
MRWG01011611
452412
Gammaproteobacteria
GCC
Gly
>WENV170964934
MRWG01080852
452412
Gammaproteobacteria
GCC
Gly
>WENV170963638
MRWG01000414
460378
Gammaproteobacteria
TAC
Val
>WENV170964780
MRWG01042649
275934
Gammaproteobacteria
GGG
Pro
>WENV170964873
MRWG01063020
271460
Gammaproteobacteria
CGG
Pro
>WENV170964356
MRWG01008956
271460
Gammaproteobacteria
CGG
Pro
>WENV170964332
MRWG01008330
271460
Gammaproteobacteria
CGG
Pro
>WENV170964608
MRWG01023321
452404
Gammaproteobacteria
TGT
Thr
>WENV170964058
MRWG01002458
275549
Gammaproteobacteria
CAT
Met
>WENV170964840
MRWG01055168
271459
Gammaproteobacteria
CCT
Arg
>WENV170964126
MRWG01003475
271459
Gammaproteobacteria
CCT
Arg
>WENV170963996
MRWG01001813
271459
Gammaproteobacteria
CCT
Arg
>WENV170963781
MRWG01000752
271459
Gammaproteobacteria
CCT
Arg
>WENV170963497
MRWG01000237
301313
Gammaproteobacteria
TGG
Pro
>WENV170964960
MRWG01088275
271200
Gammaproteobacteria
CAT
Met
>WENV170964620
MRWG01024172
271200
Gammaproteobacteria
CAT
Met
>WENV170964602
MRWG01022475
271200
Gammaproteobacteria
CAT
Met
>WENV170964279
MRWG01006720
271200
Gammaproteobacteria
CAT
Met
>WENV170964454
MRWG01013216
271456
Gammaproteobacteria
ACG
Arg
>WENV170964455
MRWG01013216
271456
Gammaproteobacteria
ACG
Arg
>WENV170964889
MRWG01064820
456709
Gammaproteobacteria
TGC
Ala
>WENV170964763
MRWG01040627
456709
Gammaproteobacteria
TGC
Ala
>WENV170964673
MRWG01029506
459731
Gammaproteobacteria
GGT
Thr
>WENV170963848
MRWG01000959
459731
Gammaproteobacteria
GGT
Thr
>WENV170964106
MRWG01003076
459479
Gammaproteobacteria
TTC
Glu
>WENV170963089
MRWG01000010
459479
Gammaproteobacteria
TTC
Glu
>WENV170964845
MRWG01057268
112371
Gammaproteobacteria
CAA
Leu
>WENV170964065
MRWG01002641
452410
Gammaproteobacteria
TAC
Val
>WENV170964514
MRWG01015596
452410
Gammaproteobacteria
TAC
Val
>WENV170964516
MRWG01015596
452410
Gammaproteobacteria
TAC
Val
>WENV170964843
MRWG01057080
452410
Gammaproteobacteria
TAC
Val
>WENV170963094
MRWG01000010
453897
Gammaproteobacteria
TAC
Val
>WENV170964910
MRWG01070288
453897
Gammaproteobacteria
TAC
Val
>WENV170964526
MRWG01016140
302461
Gammaproteobacteria
TCT
Arg
>WENV170964168
MRWG01004316
454397
Gammaproteobacteria
TGT
Thr
>WENV170964943
MRWG01084640
452414
Gammaproteobacteria
TTC
Glu
>WENV170964925
MRWG01076220
452414
Gammaproteobacteria
TTC
Glu
>WENV170964803
MRWG01046556
452414
Gammaproteobacteria
TTC
Glu
>WENV170964804
MRWG01046613
452414
Gammaproteobacteria
TTC
Glu
>WENV170963515
MRWG01000247
455973
Gammaproteobacteria
TTT
Lys
>WENV170964609
MRWG01023321
184132
Gammaproteobacteria
GTA
Tyr
>WENV170963392
MRWG01000151
454826
Gammaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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