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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170965142
MTET01003412
779495
Gammaproteobacteria
CCC
Gly
>WENV170965030
MTET01000920
180638
Gammaproteobacteria
TAA
Leu
>WENV170965057
MTET01001413
282342
Gammaproteobacteria
CAT
Met
>WENV170965206
MTET01004653
653594
Gammaproteobacteria
CCT
Arg
>WENV170965202
MTET01004531
271107
Gammaproteobacteria
CAT
Met
>WENV170965172
MTET01003845
153786
Gammaproteobacteria
TAA
Leu
>WENV170965123
MTET01003012
30593
Gammaproteobacteria
GCT
Ser
>WENV170965115
MTET01002622
180135
Gammaproteobacteria
CAA
Leu
>WENV170965116
MTET01002682
271658
Gammaproteobacteria
CCG
Arg
>WENV170965114
MTET01002585
271696
Gammaproteobacteria
CCG
Arg
>WENV170965069
MTET01001608
180127
Gammaproteobacteria
GAG
Leu
>WENV170965136
MTET01003278
180127
Gammaproteobacteria
GAG
Leu
>WENV170965043
MTET01001135
281813
Gammaproteobacteria
GAT
Ile
>WENV170965082
MTET01001982
180637
Gammaproteobacteria
TAG
Leu
>WENV170965068
MTET01001578
451876
Gammaproteobacteria
GTG
His
>WENV170965171
MTET01003740
451876
Gammaproteobacteria
GTG
His
>WENV170965104
MTET01002422
113933
Gammaproteobacteria
CAG
Leu
>WENV170965077
MTET01001842
179999
Gammaproteobacteria
CAA
Leu
>WENV170964988
MTET01000235
451732
Gammaproteobacteria
GCC
Gly
>WENV170965120
MTET01002885
451732
Gammaproteobacteria
GCC
Gly
>WENV170965135
MTET01003254
451732
Gammaproteobacteria
GCC
Gly
>WENV170965186
MTET01004051
451732
Gammaproteobacteria
GCC
Gly
>WENV170965259
MTET01005639
271409
Gammaproteobacteria
CCG
Arg
>WENV170965143
MTET01003414
86900
Gammaproteobacteria
TGA
Ser
>WENV170965045
MTET01001260
271697
Gammaproteobacteria
GAC
Val
>WENV170965195
MTET01004218
271697
Gammaproteobacteria
GAC
Val
>WENV170965063
MTET01001413
459319
Gammaproteobacteria
GAA
Phe
>WENV170965075
MTET01001804
274669
Gammaproteobacteria
CCT
Arg
>WENV170965026
MTET01000893
270907
Gammaproteobacteria
TGG
Pro
>WENV170965078
MTET01001927
271698
Gammaproteobacteria
CAT
Met
>WENV170965029
MTET01000918
271700
Gammaproteobacteria
CAT
Met
>WENV170965109
MTET01002447
271700
Gammaproteobacteria
CAT
Met
>WENV170965064
MTET01001455
779494
Gammaproteobacteria
GCA
Cys
>WENV170965222
MTET01004830
779494
Gammaproteobacteria
GCA
Cys
>WENV170965250
MTET01005505
779494
Gammaproteobacteria
GCA
Cys
>WENV170965216
MTET01004734
457624
Gammaproteobacteria
CCT
Arg
>WENV170965169
MTET01003710
271316
Gammaproteobacteria
CAT
Met
>WENV170965139
MTET01003307
271316
Gammaproteobacteria
CAT
Met
>WENV170964987
MTET01000212
458813
Gammaproteobacteria
GTT
Asn
>WENV170965022
MTET01000707
30304
Gammaproteobacteria
GCT
Ser
>WENV170965095
MTET01002090
270904
Gammaproteobacteria
CGG
Pro
>WENV170965253
MTET01005614
270904
Gammaproteobacteria
CGG
Pro
>WENV170965197
MTET01004448
472976
Gammaproteobacteria
TGT
Thr
>WENV170965233
MTET01004962
117395
Gammaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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