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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170965537
MTEU01003856
779495
Gammaproteobacteria
CCC
Gly
>WENV170965639
MTEU01005187
273854
Gammaproteobacteria
CAT
Met
>WENV170965275
MTEU01000226
180638
Gammaproteobacteria
TAA
Leu
>WENV170965478
MTEU01003078
273349
Gammaproteobacteria
TCT
Arg
>WENV170965437
MTEU01002377
653594
Gammaproteobacteria
CCT
Arg
>WENV170965551
MTEU01004076
653594
Gammaproteobacteria
CCT
Arg
>WENV170965266
MTEU01000088
455856
Gammaproteobacteria
TGT
Thr
>WENV170965399
MTEU01001995
273856
Gammaproteobacteria
GAC
Val
>WENV170965470
MTEU01002984
273870
Gammaproteobacteria
ACG
Arg
>WENV170965531
MTEU01003740
273870
Gammaproteobacteria
ACG
Arg
>WENV170965310
MTEU01000576
271107
Gammaproteobacteria
CAT
Met
>WENV170965433
MTEU01002322
455855
Gammaproteobacteria
GAA
Phe
>WENV170965492
MTEU01003290
457154
Gammaproteobacteria
GAA
Phe
>WENV170965513
MTEU01003525
30593
Gammaproteobacteria
GCT
Ser
>WENV170965443
MTEU01002510
180135
Gammaproteobacteria
CAA
Leu
>WENV170965667
MTEU01005686
271254
Gammaproteobacteria
CAT
Met
>WENV170965465
MTEU01002934
456881
Gammaproteobacteria
GGC
Ala
>WENV170965633
MTEU01005137
780011
Gammaproteobacteria
CCC
Gly
>WENV170965272
MTEU01000196
275548
Gammaproteobacteria
GTC
Asp
>WENV170965493
MTEU01003290
655197
Gammaproteobacteria
TTG
Gln
>WENV170965657
MTEU01005555
281813
Gammaproteobacteria
GAT
Ile
>WENV170965632
MTEU01005108
87214
Gammaproteobacteria
GGA
Ser
>WENV170965460
MTEU01002677
180637
Gammaproteobacteria
TAG
Leu
>WENV170965296
MTEU01000364
451876
Gammaproteobacteria
GTG
His
>WENV170965350
MTEU01000978
451876
Gammaproteobacteria
GTG
His
>WENV170965379
MTEU01001660
113933
Gammaproteobacteria
CAG
Leu
>WENV170965466
MTEU01002934
456878
Gammaproteobacteria
TTC
Glu
>WENV170965484
MTEU01003094
456878
Gammaproteobacteria
TTC
Glu
>WENV170965486
MTEU01003094
456878
Gammaproteobacteria
TTC
Glu
>WENV170965457
MTEU01002665
451869
Gammaproteobacteria
GGT
Thr
>WENV170965477
MTEU01003078
275658
Gammaproteobacteria
TGG
Pro
>WENV170965552
MTEU01004083
46137
Gammaproteobacteria
GGA
Ser
>WENV170965352
MTEU01001027
179999
Gammaproteobacteria
CAA
Leu
>WENV170965625
MTEU01005033
179999
Gammaproteobacteria
CAA
Leu
>WENV170965305
MTEU01000448
113235
Gammaproteobacteria
GAG
Leu
>WENV170965544
MTEU01003992
780241
Gammaproteobacteria
GCA
Cys
>WENV170965491
MTEU01003255
271409
Gammaproteobacteria
CCG
Arg
>WENV170965505
MTEU01003430
86900
Gammaproteobacteria
TGA
Ser
>WENV170965494
MTEU01003290
454425
Gammaproteobacteria
TGT
Thr
>WENV170965485
MTEU01003094
655385
Gammaproteobacteria
GCC
Gly
>WENV170965543
MTEU01003992
655385
Gammaproteobacteria
GCC
Gly
>WENV170965631
MTEU01005108
655385
Gammaproteobacteria
GCC
Gly
>WENV170965601
MTEU01004723
274669
Gammaproteobacteria
CCT
Arg
>WENV170965559
MTEU01004189
270907
Gammaproteobacteria
TGG
Pro
>WENV170965661
MTEU01005582
270907
Gammaproteobacteria
TGG
Pro
>WENV170965273
MTEU01000196
113234
Gammaproteobacteria
CAG
Leu
>WENV170965445
MTEU01002590
87336
Gammaproteobacteria
TGA
Ser
>WENV170965333
MTEU01000723
779494
Gammaproteobacteria
GCA
Cys
>WENV170965359
MTEU01001130
779494
Gammaproteobacteria
GCA
Cys
>WENV170965268
MTEU01000113
451870
Gammaproteobacteria
CCA
Trp
>WENV170965366
MTEU01001261
451870
Gammaproteobacteria
CCA
Trp
>WENV170965355
MTEU01001088
481051
Gammaproteobacteria
TAC
Val
>WENV170965591
MTEU01004295
271316
Gammaproteobacteria
CAT
Met
>WENV170965664
MTEU01005639
271316
Gammaproteobacteria
CAT
Met
>WENV170965306
MTEU01000448
271253
Gammaproteobacteria
CAT
Met
>WENV170965606
MTEU01004866
113232
Gammaproteobacteria
CAG
Leu
>WENV170965280
MTEU01000270
270904
Gammaproteobacteria
CGG
Pro
>WENV170965386
MTEU01001809
270904
Gammaproteobacteria
CGG
Pro
>WENV170965608
MTEU01004896
117395
Gammaproteobacteria
CAG
Leu
>WENV170965453
MTEU01002623
117395
Gammaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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