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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170966498
MTEX01011958
228572
Alphaproteobacteria
TAG
Leu
>WENV170966171
MTEX01003593
452629
Alphaproteobacteria
GAA
Phe
>WENV170966524
MTEX01012553
271268
Alphaproteobacteria
CAT
Met
>WENV170966550
MTEX01013291
180116
Alphaproteobacteria
CAA
Leu
>WENV170966150
MTEX01002962
452624
Alphaproteobacteria
CGT
Thr
>WENV170966151
MTEX01002962
271629
Alphaproteobacteria
GTG
His
>WENV170966565
MTEX01013770
779644
Alphaproteobacteria
CTG
Gln
>WENV170966379
MTEX01008357
271606
Alphaproteobacteria
CCT
Arg
>WENV170966424
MTEX01009458
271631
Alphaproteobacteria
TGG
Pro
>WENV170966431
MTEX01009707
653942
Alphaproteobacteria
TTG
Gln
>WENV170966425
MTEX01009458
273515
Alphaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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