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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170966121
MTEX01002037
273688
Betaproteobacteria
GAT
Ile
>WENV170966154
MTEX01003116
112334
Betaproteobacteria
CAG
Leu
>WENV170966338
MTEX01006788
112334
Betaproteobacteria
CAG
Leu
>WENV170966079
MTEX01001300
454902
Betaproteobacteria
CGC
Ala
>WENV170966193
MTEX01003767
273261
Betaproteobacteria
TGG
Pro
>WENV170966315
MTEX01006416
46904
Betaproteobacteria
CGA
Ser
>WENV170966437
MTEX01009967
30818
Betaproteobacteria
GGA
Ser
>WENV170966137
MTEX01002574
277292
Betaproteobacteria
TCT
Arg
>WENV170966104
MTEX01001551
463739
Betaproteobacteria
CGT
Thr
>WENV170966223
MTEX01004379
454316
Betaproteobacteria
TGT
Thr
>WENV170966278
MTEX01005774
454464
Betaproteobacteria
TAC
Val
>WENV170966483
MTEX01011574
8271
Betaproteobacteria
GCT
Ser
>WENV170966205
MTEX01004112
320802
Betaproteobacteria
TTG
Gln
>WENV170966164
MTEX01003526
154022
Betaproteobacteria
GTA
Tyr
>WENV170966061
MTEX01000378
30517
Betaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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