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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
73 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170966153
MTEX01003099
779495
Gammaproteobacteria
CCC
Gly
>WENV170966234
MTEX01004687
779495
Gammaproteobacteria
CCC
Gly
>WENV170966080
MTEX01001303
273854
Gammaproteobacteria
CAT
Met
>WENV170966317
MTEX01006512
180638
Gammaproteobacteria
TAA
Leu
>WENV170966208
MTEX01004307
282342
Gammaproteobacteria
CAT
Met
>WENV170966161
MTEX01003404
273349
Gammaproteobacteria
TCT
Arg
>WENV170966203
MTEX01004037
653594
Gammaproteobacteria
CCT
Arg
>WENV170966232
MTEX01004636
455856
Gammaproteobacteria
TGT
Thr
>WENV170966433
MTEX01009848
273870
Gammaproteobacteria
ACG
Arg
>WENV170966406
MTEX01009056
271107
Gammaproteobacteria
CAT
Met
>WENV170966132
MTEX01002258
455855
Gammaproteobacteria
GAA
Phe
>WENV170966530
MTEX01012805
457154
Gammaproteobacteria
GAA
Phe
>WENV170966100
MTEX01001385
153786
Gammaproteobacteria
TAA
Leu
>WENV170966421
MTEX01009381
153786
Gammaproteobacteria
TAA
Leu
>WENV170966398
MTEX01008650
30593
Gammaproteobacteria
GCT
Ser
>WENV170966572
MTEX01014262
180135
Gammaproteobacteria
CAA
Leu
>WENV170966556
MTEX01013444
271254
Gammaproteobacteria
CAT
Met
>WENV170966105
MTEX01001593
456881
Gammaproteobacteria
GGC
Ala
>WENV170966454
MTEX01010404
780213
Gammaproteobacteria
GCA
Cys
>WENV170966335
MTEX01006760
655884
Gammaproteobacteria
CTC
Glu
>WENV170966355
MTEX01007460
275548
Gammaproteobacteria
GTC
Asp
>WENV170966357
MTEX01007460
275548
Gammaproteobacteria
GTC
Asp
>WENV170966531
MTEX01012805
655197
Gammaproteobacteria
TTG
Gln
>WENV170966400
MTEX01008650
274673
Gammaproteobacteria
ACG
Arg
>WENV170966305
MTEX01006381
87214
Gammaproteobacteria
GGA
Ser
>WENV170966282
MTEX01005789
180637
Gammaproteobacteria
TAG
Leu
>WENV170966321
MTEX01006567
451876
Gammaproteobacteria
GTG
His
>WENV170966201
MTEX01004024
113933
Gammaproteobacteria
CAG
Leu
>WENV170966539
MTEX01012940
113933
Gammaproteobacteria
CAG
Leu
>WENV170966106
MTEX01001593
456878
Gammaproteobacteria
TTC
Glu
>WENV170966299
MTEX01006381
456878
Gammaproteobacteria
TTC
Glu
>WENV170966301
MTEX01006381
456878
Gammaproteobacteria
TTC
Glu
>WENV170966160
MTEX01003404
275658
Gammaproteobacteria
TGG
Pro
>WENV170966273
MTEX01005682
46137
Gammaproteobacteria
GGA
Ser
>WENV170966405
MTEX01009029
179999
Gammaproteobacteria
CAA
Leu
>WENV170966288
MTEX01006017
655007
Gammaproteobacteria
CTG
Gln
>WENV170966334
MTEX01006726
655007
Gammaproteobacteria
CTG
Gln
>WENV170966062
MTEX01000388
451732
Gammaproteobacteria
GCC
Gly
>WENV170966139
MTEX01002619
451732
Gammaproteobacteria
GCC
Gly
>WENV170966491
MTEX01011784
451732
Gammaproteobacteria
GCC
Gly
>WENV170966101
MTEX01001412
113235
Gammaproteobacteria
GAG
Leu
>WENV170966535
MTEX01012826
780241
Gammaproteobacteria
GCA
Cys
>WENV170966286
MTEX01005893
271409
Gammaproteobacteria
CCG
Arg
>WENV170966475
MTEX01011207
271409
Gammaproteobacteria
CCG
Arg
>WENV170966078
MTEX01001270
86900
Gammaproteobacteria
TGA
Ser
>WENV170966532
MTEX01012805
454425
Gammaproteobacteria
TGT
Thr
>WENV170966300
MTEX01006381
655385
Gammaproteobacteria
GCC
Gly
>WENV170966302
MTEX01006381
655385
Gammaproteobacteria
GCC
Gly
>WENV170966304
MTEX01006381
655385
Gammaproteobacteria
GCC
Gly
>WENV170966534
MTEX01012826
655385
Gammaproteobacteria
GCC
Gly
>WENV170966163
MTEX01003512
271697
Gammaproteobacteria
GAC
Val
>WENV170966497
MTEX01011931
271697
Gammaproteobacteria
GAC
Val
>WENV170966213
MTEX01004307
459319
Gammaproteobacteria
GAA
Phe
>WENV170966211
MTEX01004307
459319
Gammaproteobacteria
GAA
Phe
>WENV170966053
MTEX01000156
274669
Gammaproteobacteria
CCT
Arg
>WENV170966135
MTEX01002489
270907
Gammaproteobacteria
TGG
Pro
>WENV170966358
MTEX01007460
113234
Gammaproteobacteria
CAG
Leu
>WENV170966403
MTEX01008898
87336
Gammaproteobacteria
TGA
Ser
>WENV170966336
MTEX01006762
271700
Gammaproteobacteria
CAT
Met
>WENV170966216
MTEX01004310
779494
Gammaproteobacteria
GCA
Cys
>WENV170966528
MTEX01012785
779494
Gammaproteobacteria
GCA
Cys
>WENV170966258
MTEX01005543
45781
Gammaproteobacteria
GGA
Ser
>WENV170966436
MTEX01009914
276372
Gammaproteobacteria
ACG
Arg
>WENV170966229
MTEX01004571
271316
Gammaproteobacteria
CAT
Met
>WENV170966285
MTEX01005887
271316
Gammaproteobacteria
CAT
Met
>WENV170966059
MTEX01000309
30304
Gammaproteobacteria
GCT
Ser
>WENV170966102
MTEX01001412
271253
Gammaproteobacteria
CAT
Met
>WENV170966199
MTEX01003900
113232
Gammaproteobacteria
CAG
Leu
>WENV170966198
MTEX01003891
270904
Gammaproteobacteria
CGG
Pro
>WENV170966378
MTEX01008265
270904
Gammaproteobacteria
CGG
Pro
>WENV170966042
MTEX01000012
472976
Gammaproteobacteria
TGT
Thr
>WENV170966212
MTEX01004307
472976
Gammaproteobacteria
TGT
Thr
>WENV170966375
MTEX01008190
117395
Gammaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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