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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180099461
NMRC01006348
470213
Betaproteobacteria
CGT
Thr
>WENV180099465
NMRC01006561
780032
Betaproteobacteria
GCA
Cys
>WENV180099664
NMRC01022254
454453
Betaproteobacteria
GCC
Gly
>WENV180099482
NMRC01007877
655629
Betaproteobacteria
CAC
Val
>WENV180099399
NMRC01001688
454902
Betaproteobacteria
CGC
Ala
>WENV180099392
NMRC01001370
273484
Betaproteobacteria
TTG
Gln
>WENV180099585
NMRC01019883
477700
Betaproteobacteria
GCC
Gly
>WENV180099677
NMRC01022488
273391
Betaproteobacteria
TTG
Gln
>WENV180099513
NMRC01010447
454456
Betaproteobacteria
CTT
Lys
>WENV180099430
NMRC01003737
273400
Betaproteobacteria
TGG
Pro
>WENV180099737
NMRC01026235
457359
Betaproteobacteria
TTT
Lys
>WENV180099376
NMRC01000315
454563
Betaproteobacteria
TAC
Val
>WENV180099456
NMRC01005273
454227
Betaproteobacteria
GTG
His
>WENV180099554
NMRC01017082
452924
Betaproteobacteria
TGC
Ala
>WENV180099419
NMRC01003001
454559
Betaproteobacteria
TTT
Lys
>WENV180099720
NMRC01024292
179981
Betaproteobacteria
TAG
Leu
>WENV180099512
NMRC01010447
454252
Betaproteobacteria
CGC
Ala
>WENV180099589
NMRC01020089
180403
Betaproteobacteria
GAG
Leu
>WENV180099668
NMRC01022289
457606
Betaproteobacteria
TTT
Lys
>WENV180099567
NMRC01017986
273251
Betaproteobacteria
GAT
Ile
>WENV180099559
NMRC01017391
273481
Betaproteobacteria
GGG
Pro
>WENV180099538
NMRC01015202
454455
Betaproteobacteria
CCG
Arg
>WENV180099608
NMRC01021666
347832
Betaproteobacteria
GAT
Ile
>WENV180099624
NMRC01021828
289669
Betaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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