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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180100372
OAON01000276
273790
Betaproteobacteria
CAT
Met
>WENV180100390
OAON01000463
112334
Betaproteobacteria
CAG
Leu
>WENV180100398
OAON01000591
180336
Betaproteobacteria
CAA
Leu
>WENV180100369
OAON01000245
454902
Betaproteobacteria
CGC
Ala
>WENV180100384
OAON01000406
273791
Betaproteobacteria
TTG
Gln
>WENV180100340
OAON01000016
780232
Betaproteobacteria
GCA
Cys
>WENV180100344
OAON01000037
655161
Betaproteobacteria
CCC
Gly
>WENV180100347
OAON01000068
454316
Betaproteobacteria
TGT
Thr
>WENV180100393
OAON01000482
655160
Betaproteobacteria
CCT
Arg
>WENV180100404
OAON01000727
8271
Betaproteobacteria
GCT
Ser
>WENV180100405
OAON01000780
30517
Betaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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