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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180105041
OAPD01002405
655167
Alphaproteobacteria
TTC
Glu
>WENV180104995
OAPD01001087
273805
Alphaproteobacteria
ACG
Arg
>WENV180105303
OAPD01027560
452884
Alphaproteobacteria
CCA
Trp
>WENV180105084
OAPD01004276
8340
Alphaproteobacteria
GCT
Ser
>WENV180105730
OAPD01172562
780486
Alphaproteobacteria
TCC
Gly
>WENV180105348
OAPD01036828
273554
Alphaproteobacteria
CCG
Arg
>WENV180105600
OAPD01112106
483604
Alphaproteobacteria
TTT
Lys
>WENV180105610
OAPD01117805
297572
Alphaproteobacteria
GTG
His
>WENV180104925
OAPD01000028
452894
Alphaproteobacteria
CCA
Trp
>WENV180105052
OAPD01002795
653532
Alphaproteobacteria
GTT
Asn
>WENV180105034
OAPD01002188
276129
Alphaproteobacteria
CAT
Met
>WENV180105254
OAPD01020645
274131
Alphaproteobacteria
CAT
Met
>WENV180105001
OAPD01001215
299732
Alphaproteobacteria
ACG
Arg
>WENV180105372
OAPD01040612
273428
Alphaproteobacteria
TCG
Arg
>WENV180105524
OAPD01084675
113188
Alphaproteobacteria
GAG
Leu
>WENV180105355
OAPD01038301
287552
Alphaproteobacteria
GAT
Ile
>WENV180105310
OAPD01028537
272979
Alphaproteobacteria
GAT
Ile
>WENV180105059
OAPD01003057
655018
Alphaproteobacteria
TTC
Glu
>WENV180105403
OAPD01046985
655166
Alphaproteobacteria
CAC
Val
>WENV180104971
OAPD01000465
270796
Alphaproteobacteria
GTC
Asp
>WENV180104986
OAPD01000757
270796
Alphaproteobacteria
GTC
Asp
>WENV180105657
OAPD01134362
273603
Alphaproteobacteria
TGG
Pro
>WENV180105120
OAPD01006960
655271
Alphaproteobacteria
GGT
Thr
>WENV180105241
OAPD01019295
654944
Alphaproteobacteria
TGT
Thr
>WENV180105535
OAPD01088291
452755
Alphaproteobacteria
TAC
Val
>WENV180104967
OAPD01000431
656140
Alphaproteobacteria
GAC
Val
>WENV180104999
OAPD01001199
780582
Alphaproteobacteria
TCC
Gly
>WENV180105235
OAPD01017939
474526
Alphaproteobacteria
TAC
Val
>WENV180105219
OAPD01017007
654103
Alphaproteobacteria
GAA
Phe
>WENV180104987
OAPD01000818
46069
Alphaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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