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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180107909
OAPH01018704
299732
Alphaproteobacteria
ACG
Arg
>WENV180108188
OAPH01061563
274131
Alphaproteobacteria
CAT
Met
>WENV180108256
OAPH01076952
452884
Alphaproteobacteria
CCA
Trp
>WENV180107856
OAPH01013982
452894
Alphaproteobacteria
CCA
Trp
>WENV180107872
OAPH01014869
273554
Alphaproteobacteria
CCG
Arg
>WENV180107968
OAPH01024587
270798
Alphaproteobacteria
CGG
Pro
>WENV180107710
OAPH01002762
656140
Alphaproteobacteria
GAC
Val
>WENV180108036
OAPH01034964
655271
Alphaproteobacteria
GGT
Thr
>WENV180108089
OAPH01041588
653532
Alphaproteobacteria
GTT
Asn
>WENV180107697
OAPH01002363
452755
Alphaproteobacteria
TAC
Val
>WENV180108306
OAPH01088525
780486
Alphaproteobacteria
TCC
Gly
>WENV180107921
OAPH01019272
780582
Alphaproteobacteria
TCC
Gly
>WENV180108698
OAPH01254294
654995
Alphaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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