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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180107771
OAPH01006593
271287
Gammaproteobacteria
CAT
Met
>WENV180107772
OAPH01006635
458351
Gammaproteobacteria
TTG
Gln
>WENV180107811
OAPH01009158
30792
Gammaproteobacteria
GGA
Ser
>WENV180107829
OAPH01010852
20134
Gammaproteobacteria
GCT
Ser
>WENV180107999
OAPH01027987
273754
Gammaproteobacteria
GTT
Asn
>WENV180108000
OAPH01028088
276972
Gammaproteobacteria
CCA
Trp
>WENV180108040
OAPH01035271
459731
Gammaproteobacteria
GGT
Thr
>WENV180108146
OAPH01048991
270873
Gammaproteobacteria
GAT
Ile
>WENV180108157
OAPH01050963
270982
Gammaproteobacteria
GAT
Ile
>WENV180108324
OAPH01095191
270982
Gammaproteobacteria
GAT
Ile
>WENV180108341
OAPH01097549
180152
Gammaproteobacteria
TAG
Leu
>WENV180108398
OAPH01106507
453181
Gammaproteobacteria
GTG
His
>WENV180108397
OAPH01106507
276976
Gammaproteobacteria
TCT
Arg
>WENV180108395
OAPH01106507
181084
Gammaproteobacteria
TAG
Leu
>WENV180108396
OAPH01106507
276975
Gammaproteobacteria
TGG
Pro
>WENV180108426
OAPH01113868
112293
Gammaproteobacteria
TAA
Leu
>WENV180108427
OAPH01113868
779470
Gammaproteobacteria
GCA
Cys
>WENV180108461
OAPH01126986
454814
Gammaproteobacteria
TAC
Val
>WENV180108462
OAPH01126986
454091
Gammaproteobacteria
GGC
Ala
>WENV180108487
OAPH01138159
276973
Gammaproteobacteria
GAC
Val
>WENV180108521
OAPH01160488
276974
Gammaproteobacteria
GGG
Pro
>WENV180108559
OAPH01178593
271464
Gammaproteobacteria
TGG
Pro
>WENV180108566
OAPH01182897
456265
Gammaproteobacteria
TGT
Thr
>WENV180108595
OAPH01196641
113485
Gammaproteobacteria
CAA
Leu
>WENV180108620
OAPH01208605
458352
Gammaproteobacteria
TTG
Gln
>WENV180108619
OAPH01208605
181084
Gammaproteobacteria
TAG
Leu
>WENV180108647
OAPH01224703
275003
Gammaproteobacteria
CAT
Met
>WENV180108646
OAPH01224703
655755
Gammaproteobacteria
TTG
Gln
>WENV180108696
OAPH01252687
459731
Gammaproteobacteria
GGT
Thr
>WENV180108762
OAPH01279744
451780
Gammaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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