This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1001889
SRR001308.111854
454508
Alphaproteobacteria
CGC
Ala
>SRA1001941
SRR001308.142472
788550
Alphaproteobacteria
TCC
Gly
>SRA1001986
SRR001308.167363
180542
Alphaproteobacteria
TAG
Leu
>SRA1001729
SRR001308.20491
112742
Alphaproteobacteria
GAG
Leu
>SRA1002055
SRR001308.215553
112742
Alphaproteobacteria
GAG
Leu
>SRA1002074
SRR001308.226542
654915
Alphaproteobacteria
GCC
Gly
>SRA1002156
SRR001308.275593
454056
Alphaproteobacteria
CGT
Thr
>SRA1002188
SRR001308.294589
654913
Alphaproteobacteria
GTT
Asn
>SRA1002214
SRR001308.307791
654953
Alphaproteobacteria
GGT
Thr
>SRA1002242
SRR001308.325037
468172
Alphaproteobacteria
TGC
Ala
>SRA1002260
SRR001308.331715
180864
Alphaproteobacteria
CAG
Leu
>SRA1002323
SRR001308.374360
468172
Alphaproteobacteria
TGC
Ala
>SRA1001817
SRR001308.69686
457364
Alphaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK