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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV077988
AAFY01003157
243823
Gammaproteobacteria
GCC
Gly
>WENV077989
AAFY01003157
243823
Gammaproteobacteria
GCC
Gly
>WENV077990
AAFY01003157
243823
Gammaproteobacteria
GCC
Gly
>WENV078095
AAFY01020008
145489
Gammaproteobacteria
GAT
Ile
>WENV078127
AAFY01024578
189955
Gammaproteobacteria
GAT
Ile
>WENV078014
AAFY01005432
108266
Gammaproteobacteria
GTA
Tyr
>WENV078050
AAFY01013404
148440
Gammaproteobacteria
>WENV078015
AAFY01006112
193275
Gammaproteobacteria
GAT
Ile
>WENV078023
AAFY01007193
193275
Gammaproteobacteria
GAT
Ile
>WENV078045
AAFY01012916
432501
Gammaproteobacteria
GCA
Cys
>WENV078046
AAFY01012916
83313
Gammaproteobacteria
TAA
Leu
>WENV078316
AAFZ01025151
173648
Gammaproteobacteria
TCT
Arg
>WENV078184
AAFZ01004403
146791
Gammaproteobacteria
GAC
Val
>WENV078257
AAFZ01016211
237980
Gammaproteobacteria
GAA
Phe
>WENV078243
AAFZ01013928
45345
Gammaproteobacteria
GGA
Ser
>WENV078305
AAFZ01023499
319098
Gammaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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