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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV078684
AAQK01006813
235154
Bacillota
GTT
Asn
>WENV078560
AAQK01001457
238910
Bacillota
CTT
Lys
>WENV078671
AAQK01005905
152512
Bacillota
CCT
Arg
>WENV078687
AAQK01007063
144668
Bacillota
GTC
Asp
>WENV078760
AAQK01010056
429429
Bacillota
CCA
Trp
>WENV078717
AAQK01009054
11034
Bacillota
GGA
Ser
>WENV078718
AAQK01009054
11034
Bacillota
GGA
Ser
>WENV078757
AAQK01009949
149041
Bacillota
GTC
Asp
>WENV078641
AAQK01004761
263765
Bacillota
TAC
Val
>WENV078727
AAQK01009147
263765
Bacillota
TAC
Val
>WENV078755
AAQK01009949
239832
Bacillota
TGT
Thr
>WENV078611
AAQK01004047
411549
Bacillota
TTG
Gln
>WENV078749
AAQK01009944
241432
Bacillota
TGT
Thr
>WENV078780
AAQK01010463
272992
Bacillota
CTT
Lys
>WENV078751
AAQK01009944
272488
Bacillota
GAA
Phe
>WENV078724
AAQK01009132
273862
Bacillota
TGC
Ala
>WENV078769
AAQK01010160
273862
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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