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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV078933
AAQL01007880
24650
Bacillota
TAA
Leu
>WENV078823
AAQL01001781
235134
Bacillota
GAA
Phe
>WENV078952
AAQL01008276
267556
Bacillota
TAC
Val
>WENV078969
AAQL01009002
37071
Bacillota
TGA
Ser
>WENV078982
AAQL01009374
338147
Bacillota
CTC
Glu
>WENV079045
AAQL01011575
235114
Bacillota
TTT
Lys
>WENV078832
AAQL01002157
144668
Bacillota
GTC
Asp
>WENV078903
AAQL01006505
144668
Bacillota
GTC
Asp
>WENV078922
AAQL01007772
144668
Bacillota
GTC
Asp
>WENV078953
AAQL01008276
144668
Bacillota
GTC
Asp
>WENV078838
AAQL01002434
247057
Bacillota
TGC
Ala
>WENV078863
AAQL01004188
247057
Bacillota
TGC
Ala
>WENV078945
AAQL01008131
247057
Bacillota
TGC
Ala
>WENV079049
AAQL01011600
247057
Bacillota
TGC
Ala
>WENV078995
AAQL01010366
274189
Bacillota
TGT
Thr
>WENV079003
AAQL01010886
235079
Bacillota
GAA
Phe
>WENV079035
AAQL01011552
173314
Bacillota
GAT
Ile
>WENV079028
AAQL01011501
149041
Bacillota
GTC
Asp
>WENV079056
AAQL01011784
169968
Bacillota
CAT
Met
>WENV078949
AAQL01008276
169968
Bacillota
CAT
Met
>WENV078817
AAQL01001370
152492
Bacillota
GGG
Pro
>WENV078822
AAQL01001781
240017
Bacillota
GCC
Gly
>WENV078825
AAQL01001781
263765
Bacillota
TAC
Val
>WENV078837
AAQL01002420
263765
Bacillota
TAC
Val
>WENV078994
AAQL01010266
263765
Bacillota
TAC
Val
>WENV078906
AAQL01006562
412387
Bacillota
GCA
Cys
>WENV078963
AAQL01008548
18852
Bacillota
GCT
Ser
>WENV079026
AAQL01011501
239832
Bacillota
TGT
Thr
>WENV078937
AAQL01007880
152151
Bacillota
TCT
Arg
>WENV078927
AAQL01007772
235127
Bacillota
TTT
Lys
>WENV079021
AAQL01011497
241432
Bacillota
TGT
Thr
>WENV079039
AAQL01011575
144652
Bacillota
GTC
Asp
>WENV079015
AAQL01011398
247734
Bacillota
TGC
Ala
>WENV079044
AAQL01011575
235113
Bacillota
GAA
Phe
>WENV079042
AAQL01011575
95563
Bacillota
GTA
Tyr
>WENV078948
AAQL01008276
272488
Bacillota
GAA
Phe
>WENV079057
AAQL01011784
272488
Bacillota
GAA
Phe
>WENV078813
AAQL01000843
119513
Bacillota
CAA
Leu
>WENV078884
AAQL01005445
238945
Bacillota
GCC
Gly
>WENV078954
AAQL01008296
238945
Bacillota
GCC
Gly
>WENV078967
AAQL01008925
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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