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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV08000204
ABLY01016215
338269
Alphaproteobacteria
GTT
Asn
>ENV08000229
ABLY01057472
338269
Alphaproteobacteria
GTT
Asn
>ENV08000200
ABLY01012757
148306
Alphaproteobacteria
GTG
His
>ENV08000217
ABLY01029963
148306
Alphaproteobacteria
GTG
His
>ENV08000227
ABLY01052187
148306
Alphaproteobacteria
GTG
His
>ENV08000240
ABLY01075526
148306
Alphaproteobacteria
GTG
His
>ENV08000205
ABLY01016752
81064
Alphaproteobacteria
GTA
Tyr
>ENV08000215
ABLY01028919
81064
Alphaproteobacteria
GTA
Tyr
>ENV08000226
ABLY01050397
81064
Alphaproteobacteria
GTA
Tyr
>ENV08000221
ABLY01035535
95928
Alphaproteobacteria
TAG
Leu
>ENV08000230
ABLY01060314
95928
Alphaproteobacteria
TAG
Leu
>ENV08000258
ABLY01133537
236134
Alphaproteobacteria
TAC
Val
>ENV08000284
ABLY01323333
236134
Alphaproteobacteria
TAC
Val
>ENV08000288
ABLY01430801
236134
Alphaproteobacteria
TAC
Val
>ENV08000253
ABLY01120107
385404
Alphaproteobacteria
CTC
Glu
>ENV08000274
ABLY01186921
412260
Alphaproteobacteria
TCC
Gly
>ENV08000271
ABLY01183981
236004
Alphaproteobacteria
TTT
Lys
>ENV08000292
ABLY01539987
240120
Alphaproteobacteria
CTT
Lys
>ENV08000220
ABLY01035503
113638
Alphaproteobacteria
GAG
Leu
>ENV08000189
ABLY01004374
19688
Alphaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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