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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV09001274
ABSR01000022
144934
Betaproteobacteria
TTG
Gln
>ENV09001278
ABSR01000108
147332
Betaproteobacteria
CAT
Met
>ENV09001282
ABSR01000169
148282
Betaproteobacteria
TGG
Pro
>ENV09001285
ABSR01000468
145695
Betaproteobacteria
GGG
Pro
>ENV09001293
ABSR01000664
4627
Betaproteobacteria
GCT
Ser
>ENV09001301
ABSR01000793
95620
Betaproteobacteria
GTA
Tyr
>ENV09001304
ABSR01000873
148282
Betaproteobacteria
TGG
Pro
>ENV09001312
ABSR01001194
148282
Betaproteobacteria
TGG
Pro
>ENV09001315
ABSR01001258
239009
Betaproteobacteria
TAC
Val
>ENV09001318
ABSR01001339
95620
Betaproteobacteria
GTA
Tyr
>ENV09001322
ABSR01001345
148282
Betaproteobacteria
TGG
Pro
>ENV09001324
ABSR01001410
239009
Betaproteobacteria
TAC
Val
>ENV09001326
ABSR01001481
148282
Betaproteobacteria
TGG
Pro
>ENV09001328
ABSR01001590
147332
Betaproteobacteria
CAT
Met
>ENV09001331
ABSR01001872
4627
Betaproteobacteria
GCT
Ser
>ENV09001336
ABSR01002106
239009
Betaproteobacteria
TAC
Val
>ENV09001339
ABSR01002162
147332
Betaproteobacteria
CAT
Met
>ENV09001340
ABSR01002289
239009
Betaproteobacteria
TAC
Val
>ENV09001343
ABSR01002296
148282
Betaproteobacteria
TGG
Pro
>ENV09001345
ABSR01002384
4627
Betaproteobacteria
GCT
Ser
>ENV09001348
ABSR01002410
148282
Betaproteobacteria
TGG
Pro
>ENV09001352
ABSR01002458
147332
Betaproteobacteria
CAT
Met
>ENV09001357
ABSR01002844
293915
Betaproteobacteria
GTT
Asn
>ENV09001364
ABSR01003424
148282
Betaproteobacteria
TGG
Pro
>ENV09001370
ABSR01003714
148282
Betaproteobacteria
TGG
Pro
>ENV09001373
ABSR01003855
145695
Betaproteobacteria
GGG
Pro
>ENV09001375
ABSR01003909
293915
Betaproteobacteria
GTT
Asn
>ENV09001381
ABSR01004080
239009
Betaproteobacteria
TAC
Val
>ENV09001388
ABSR01004349
145695
Betaproteobacteria
GGG
Pro
>ENV09001390
ABSR01004580
148282
Betaproteobacteria
TGG
Pro
>ENV09001398
ABSR01004748
95620
Betaproteobacteria
GTA
Tyr
>ENV09001401
ABSR01005039
352197
Betaproteobacteria
GGT
Thr
>ENV09001413
ABSR01005822
144934
Betaproteobacteria
TTG
Gln
>ENV09001416
ABSR01006001
147332
Betaproteobacteria
CAT
Met
>ENV09001424
ABSR01006578
148282
Betaproteobacteria
TGG
Pro
>ENV09001440
ABSR01008649
304536
Betaproteobacteria
TGT
Thr
>ENV09001450
ABSR01010212
238002
Betaproteobacteria
GCC
Gly
>ENV09001463
ABSR01012140
95723
Betaproteobacteria
CAG
Leu
>ENV09001470
ABSR01013362
304536
Betaproteobacteria
TGT
Thr
>ENV09001471
ABSR01013550
148282
Betaproteobacteria
TGG
Pro
>ENV09001488
ABSR01016852
147332
Betaproteobacteria
CAT
Met
>ENV09001492
ABSR01018400
239140
Betaproteobacteria
TTT
Lys
>ENV09001510
ABSR01021136
154591
Betaproteobacteria
CAT
Met
>ENV09001519
ABSR01024042
238002
Betaproteobacteria
GCC
Gly
>ENV09001524
ABSR01024360
239009
Betaproteobacteria
TAC
Val
>ENV09001533
ABSR01025017
148282
Betaproteobacteria
TGG
Pro
>ENV09001555
ABSR01028671
147332
Betaproteobacteria
CAT
Met
>ENV09001564
ABSR01030211
147332
Betaproteobacteria
CAT
Met
>ENV09001573
ABSR01032591
147332
Betaproteobacteria
CAT
Met
>ENV09001584
ABSR01033361
147332
Betaproteobacteria
CAT
Met
>ENV09001585
ABSR01033817
145695
Betaproteobacteria
GGG
Pro
>ENV09001590
ABSR01033946
238002
Betaproteobacteria
GCC
Gly
>ENV09001594
ABSR01034670
238002
Betaproteobacteria
GCC
Gly
>ENV09001597
ABSR01035182
144934
Betaproteobacteria
TTG
Gln
>ENV09001600
ABSR01035625
145695
Betaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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