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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
68 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV11100273
AEKF01000006
338394
Bacillota
CTG
Gln
>WENV11100334
AEKF01000082
254421
Bacillota
TAC
Val
>WENV11100340
AEKF01000096
254421
Bacillota
TAC
Val
>WENV11100311
AEKF01000039
417145
Bacillota
CCA
Trp
>WENV11100304
AEKF01000039
16469
Bacillota
GCT
Ser
>WENV11100282
AEKF01000010
58784
Bacillota
CAG
Leu
>WENV11100280
AEKF01000009
145059
Bacillota
TTT
Lys
>WENV11100289
AEKF01000021
235623
Bacillota
CCT
Arg
>WENV11100281
AEKF01000009
411673
Bacillota
GCA
Cys
>WENV11100327
AEKF01000075
147487
Bacillota
ACG
Arg
>WENV11100344
AEKF01000096
147487
Bacillota
ACG
Arg
>WENV11100269
AEKF01000006
338392
Bacillota
CTC
Glu
>WENV11100286
AEKF01000017
338395
Bacillota
>WENV11100276
AEKF01000007
338391
Bacillota
TTG
Gln
>WENV11100329
AEKF01000078
338391
Bacillota
TTG
Gln
>WENV11100322
AEKF01000069
151971
Bacillota
TCT
Arg
>WENV11100358
AEKF01000126
342727
Bacillota
TTG
Gln
>WENV11100251
AEKF01000001
338396
Bacillota
TTC
Glu
>WENV11100278
AEKF01000007
338396
Bacillota
TTC
Glu
>WENV11100272
AEKF01000006
235622
Bacillota
CGT
Thr
>WENV11100305
AEKF01000039
339151
Bacillota
TTC
Glu
>WENV11100284
AEKF01000013
338390
Bacillota
GTT
Asn
>WENV11100316
AEKF01000040
338390
Bacillota
GTT
Asn
>WENV11100330
AEKF01000078
44896
Bacillota
AAG
Leu
>WENV11100250
AEKF01000001
145055
Bacillota
TCT
Arg
>WENV11100354
AEKF01000096
17418
Bacillota
GCT
Ser
>WENV11100290
AEKF01000023
83351
Bacillota
GTA
Tyr
>WENV11100293
AEKF01000024
6897
Bacillota
>WENV11100270
AEKF01000006
235621
Bacillota
GTT
Asn
>WENV11100271
AEKF01000006
235621
Bacillota
GTT
Asn
>WENV11100319
AEKF01000056
243035
Bacillota
GGT
Thr
>WENV11100342
AEKF01000096
254693
Bacillota
TGT
Thr
>WENV11100301
AEKF01000039
151851
Bacillota
GTC
Asp
>WENV11100308
AEKF01000039
151851
Bacillota
GTC
Asp
>WENV11100335
AEKF01000082
166256
Bacillota
GTC
Asp
>WENV11100349
AEKF01000096
166256
Bacillota
GTC
Asp
>WENV11100306
AEKF01000039
4777
Bacillota
TGA
Ser
>WENV11100323
AEKF01000074
4777
Bacillota
TGA
Ser
>WENV11100313
AEKF01000039
342640
Bacillota
TTG
Gln
>WENV11100310
AEKF01000039
113622
Bacillota
GTA
Tyr
>WENV11100249
AEKF01000001
10573
Bacillota
CGA
Ser
>WENV11100287
AEKF01000017
235620
Bacillota
CTT
Lys
>WENV11100288
AEKF01000019
235620
Bacillota
CTT
Lys
>WENV11100253
AEKF01000002
145060
Bacillota
CAT
Met
>WENV11100275
AEKF01000007
80642
Bacillota
GTA
Tyr
>WENV11100328
AEKF01000078
80642
Bacillota
GTA
Tyr
>WENV11100357
AEKF01000126
80642
Bacillota
GTA
Tyr
>WENV11100279
AEKF01000007
95657
Bacillota
TAG
Leu
>WENV11100355
AEKF01000106
16440
Bacillota
CGA
Ser
>WENV11100348
AEKF01000096
7578
Bacillota
>WENV11100336
AEKF01000082
243335
Bacillota
GAA
Phe
>WENV11100350
AEKF01000096
243335
Bacillota
GAA
Phe
>WENV11100268
AEKF01000006
58782
Bacillota
CAA
Leu
>WENV11100320
AEKF01000066
342864
Bacillota
TTC
Glu
>WENV11100331
AEKF01000079
342864
Bacillota
TTC
Glu
>WENV11100312
AEKF01000039
242879
Bacillota
GTG
His
>WENV11100346
AEKF01000096
146741
Bacillota
CAT
Met
>WENV11100324
AEKF01000075
243336
Bacillota
GTT
Asn
>WENV11100302
AEKF01000039
235523
Bacillota
GAA
Phe
>WENV11100309
AEKF01000039
235523
Bacillota
GAA
Phe
>WENV11100315
AEKF01000039
60216
Bacillota
CAA
Leu
>WENV11100252
AEKF01000002
338393
Bacillota
TTC
Glu
>WENV11100274
AEKF01000006
338393
Bacillota
TTC
Glu
>WENV11100277
AEKF01000007
16263
Bacillota
GCT
Ser
>WENV11100321
AEKF01000066
342860
Bacillota
CTC
Glu
>WENV11100297
AEKF01000031
342865
Bacillota
TCC
Gly
>WENV11100351
AEKF01000096
342865
Bacillota
TCC
Gly
>WENV11100352
AEKF01000096
342865
Bacillota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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