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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170002389
AGTN01015872
146578
Alphaproteobacteria
CGG
Pro
>WENV170004351
AGTN01650328
99077
Alphaproteobacteria
CAG
Leu
>WENV170004178
AGTN01590245
165250
Alphaproteobacteria
TGG
Pro
>WENV170003486
AGTN01352254
59382
Alphaproteobacteria
CAG
Leu
>WENV170003114
AGTN01230111
96031
Alphaproteobacteria
TAG
Leu
>WENV170003508
AGTN01362379
152452
Alphaproteobacteria
ACG
Arg
>WENV170003076
AGTN01221822
96238
Alphaproteobacteria
GAG
Leu
>WENV170003437
AGTN01333537
412798
Alphaproteobacteria
CTG
Gln
>WENV170004073
AGTN01552609
412798
Alphaproteobacteria
CTG
Gln
>WENV170002536
AGTN01060572
293056
Alphaproteobacteria
TGC
Ala
>WENV170002755
AGTN01119903
149985
Alphaproteobacteria
ACG
Arg
>WENV170004116
AGTN01565027
149985
Alphaproteobacteria
ACG
Arg
>WENV170004074
AGTN01552640
268154
Alphaproteobacteria
TGT
Thr
>WENV170004125
AGTN01568872
248021
Alphaproteobacteria
CTT
Lys
>WENV170004067
AGTN01549928
235847
Alphaproteobacteria
CAT
Met
>WENV170003974
AGTN01519743
25586
Alphaproteobacteria
TGA
Ser
>WENV170004332
AGTN01642616
202510
Alphaproteobacteria
TGG
Pro
>WENV170004129
AGTN01571497
159305
Alphaproteobacteria
GTC
Asp
>WENV170004206
AGTN01600960
411726
Alphaproteobacteria
GCA
Cys
>WENV170004452
AGTN01683384
352247
Alphaproteobacteria
TTG
Gln
>WENV170003253
AGTN01275872
128789
Alphaproteobacteria
CCA
Trp
>WENV170002821
AGTN01139326
190043
Alphaproteobacteria
CAT
Met
>WENV170004076
AGTN01554024
412459
Alphaproteobacteria
CTG
Gln
>WENV170002836
AGTN01143933
368245
Alphaproteobacteria
>WENV170002442
AGTN01030228
202487
Alphaproteobacteria
CAT
Met
>WENV170004405
AGTN01669891
340956
Alphaproteobacteria
TTG
Gln
>WENV170002545
AGTN01063575
127451
Alphaproteobacteria
GGG
Pro
>WENV170004633
AGTN01742124
127451
Alphaproteobacteria
GGG
Pro
>WENV170004190
AGTN01595332
294221
Alphaproteobacteria
GAA
Phe
>WENV170003065
AGTN01215879
99414
Alphaproteobacteria
GTA
Tyr
>WENV170004397
AGTN01667850
74116
Alphaproteobacteria
CAG
Leu
>WENV170002387
AGTN01014982
175748
Alphaproteobacteria
CAT
Met
>WENV170002928
AGTN01171562
175748
Alphaproteobacteria
CAT
Met
>WENV170003553
AGTN01372873
175748
Alphaproteobacteria
CAT
Met
>WENV170004360
AGTN01657302
175748
Alphaproteobacteria
CAT
Met
>WENV170003163
AGTN01246958
412260
Alphaproteobacteria
TCC
Gly
>WENV170002568
AGTN01070424
257192
Alphaproteobacteria
CTT
Lys
>WENV170003347
AGTN01306474
253273
Alphaproteobacteria
CTT
Lys
>WENV170004306
AGTN01632295
256414
Alphaproteobacteria
CTT
Lys
>WENV170002373
AGTN01011325
5143
Alphaproteobacteria
GCT
Ser
>WENV170003927
AGTN01504234
338268
Alphaproteobacteria
GAC
Val
>WENV170002753
AGTN01119026
96994
Alphaproteobacteria
TAG
Leu
>WENV170004265
AGTN01620683
61017
Alphaproteobacteria
CAG
Leu
>WENV170003069
AGTN01217278
342876
Alphaproteobacteria
GAC
Val
>WENV170003210
AGTN01260743
148845
Alphaproteobacteria
GGG
Pro
>WENV170004100
AGTN01559991
148845
Alphaproteobacteria
GGG
Pro
>WENV170003778
AGTN01447842
339432
Alphaproteobacteria
GTT
Asn
>WENV170002346
AGTN01000706
345454
Alphaproteobacteria
GGT
Thr
>WENV170004042
AGTN01544070
364533
Alphaproteobacteria
GCC
Gly
>WENV170002606
AGTN01081945
235841
Alphaproteobacteria
GTT
Asn
>WENV170003949
AGTN01511467
235841
Alphaproteobacteria
GTT
Asn
>WENV170002452
AGTN01034498
281959
Alphaproteobacteria
CGC
Ala
>WENV170003037
AGTN01207752
281959
Alphaproteobacteria
CGC
Ala
>WENV170002655
AGTN01093629
341164
Alphaproteobacteria
GCC
Gly
>WENV170003510
AGTN01363334
237281
Alphaproteobacteria
CGT
Thr
>WENV170002690
AGTN01101739
65244
Alphaproteobacteria
CAG
Leu
>WENV170004109
AGTN01563236
65244
Alphaproteobacteria
CAG
Leu
>WENV170003315
AGTN01295197
338622
Alphaproteobacteria
GTT
Asn
>WENV170002776
AGTN01125253
424918
Alphaproteobacteria
TCC
Gly
>WENV170004420
AGTN01673123
424918
Alphaproteobacteria
TCC
Gly
>WENV170003785
AGTN01450763
188632
Alphaproteobacteria
GAT
Ile
>WENV170004019
AGTN01537553
188632
Alphaproteobacteria
GAT
Ile
>WENV170002431
AGTN01028470
175860
Alphaproteobacteria
CCT
Arg
>WENV170003036
AGTN01206985
175860
Alphaproteobacteria
CCT
Arg
>WENV170003940
AGTN01508422
237479
Alphaproteobacteria
TTT
Lys
>WENV170002547
AGTN01064447
242985
Alphaproteobacteria
GGC
Ala
>WENV170003668
AGTN01412765
352191
Alphaproteobacteria
GGT
Thr
>WENV170003433
AGTN01331913
145340
Alphaproteobacteria
CCT
Arg
>WENV170003302
AGTN01292716
159404
Alphaproteobacteria
GTG
His
>WENV170003047
AGTN01210038
303842
Alphaproteobacteria
TAC
Val
>WENV170003434
AGTN01331980
303842
Alphaproteobacteria
TAC
Val
>WENV170003965
AGTN01517635
303842
Alphaproteobacteria
TAC
Val
>WENV170003639
AGTN01403158
352138
Alphaproteobacteria
TTG
Gln
>WENV170004464
AGTN01687426
184904
Alphaproteobacteria
ACG
Arg
>WENV170002471
AGTN01040859
259072
Alphaproteobacteria
CGC
Ala
>WENV170003500
AGTN01359637
259072
Alphaproteobacteria
CGC
Ala
>WENV170003483
AGTN01352010
25738
Alphaproteobacteria
TGA
Ser
>WENV170002831
AGTN01141910
342846
Alphaproteobacteria
GAC
Val
>WENV170003674
AGTN01414337
152034
Alphaproteobacteria
GTC
Asp
>WENV170004111
AGTN01563449
152034
Alphaproteobacteria
GTC
Asp
>WENV170003982
AGTN01524782
254575
Alphaproteobacteria
TTT
Lys
>WENV170003864
AGTN01477947
101826
Alphaproteobacteria
TAG
Leu
>WENV170004225
AGTN01609975
101826
Alphaproteobacteria
TAG
Leu
>WENV170004312
AGTN01634052
101826
Alphaproteobacteria
TAG
Leu
>WENV170003463
AGTN01343542
237579
Alphaproteobacteria
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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