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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170004955
AJWZ01003064
155958
Bacillota
GAT
Ile
>WENV170005023
AJWZ01010339
235098
Bacillota
GAC
Val
>WENV170005011
AJWZ01008464
338152
Bacillota
TTC
Glu
>WENV170005077
AJWZ01012024
148239
Bacillota
TCT
Arg
>WENV170005036
AJWZ01011006
20749
Bacillota
GCT
Ser
>WENV170004924
AJWZ01001164
304022
Bacillota
GCC
Gly
>WENV170004949
AJWZ01002746
304022
Bacillota
GCC
Gly
>WENV170005021
AJWZ01010137
304022
Bacillota
GCC
Gly
>WENV170005059
AJWZ01011612
307003
Bacillota
TGC
Ala
>WENV170005049
AJWZ01011100
238910
Bacillota
CTT
Lys
>WENV170005020
AJWZ01010137
235079
Bacillota
GAA
Phe
>WENV170004977
AJWZ01005539
338149
Bacillota
CTC
Glu
>WENV170004995
AJWZ01007090
144599
Bacillota
GTC
Asp
>WENV170005078
AJWZ01012024
144610
Bacillota
GTG
His
>WENV170004982
AJWZ01005780
298620
Bacillota
CAT
Met
>WENV170004944
AJWZ01002338
157838
Bacillota
GTC
Asp
>WENV170004978
AJWZ01005539
144621
Bacillota
GTT
Asn
>WENV170004951
AJWZ01002791
21693
Bacillota
GCT
Ser
>WENV170004930
AJWZ01001395
292012
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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