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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170006421
AMWB02021672
182331
Euryarchaeota
TGT
Thr
>WENV170007966
AMWB02168163
147811
Euryarchaeota
GAT
Ile
>WENV170007968
AMWB02168163
339957
Euryarchaeota
GGC
Ala
>WENV170006383
AMWB02019764
238535
Euryarchaeota
CTG
Gln
>WENV170007318
AMWB02106094
238532
Euryarchaeota
TGC
Ala
>WENV170006237
AMWB02009632
182614
Euryarchaeota
TAC
Val
>WENV170007760
AMWB02155675
133322
Euryarchaeota
>WENV170007882
AMWB02162888
296290
Euryarchaeota
GTT
Asn
>WENV170006536
AMWB02030293
360399
Euryarchaeota
CGC
Ala
>WENV170007425
AMWB02121311
360399
Euryarchaeota
CGC
Ala
>WENV170006240
AMWB02010153
182333
Euryarchaeota
TTT
Lys
>WENV170007319
AMWB02106094
349722
Euryarchaeota
>WENV170006586
AMWB02034374
127190
Euryarchaeota
CAT
Met
>WENV170006961
AMWB02071386
47355
Euryarchaeota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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