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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170014606
AYSL01000243
338634
Gammaproteobacteria
GCC
Gly
>WENV170014622
AYSL01001364
338634
Gammaproteobacteria
GCC
Gly
>WENV170014715
AYSL01006529
98124
Gammaproteobacteria
GAG
Leu
>WENV170014666
AYSL01003440
338635
Gammaproteobacteria
GGT
Thr
>WENV170014729
AYSL01007558
236030
Gammaproteobacteria
CCA
Trp
>WENV170014653
AYSL01002917
236480
Gammaproteobacteria
GTG
His
>WENV170014724
AYSL01007324
236480
Gammaproteobacteria
GTG
His
>WENV170014630
AYSL01001568
236026
Gammaproteobacteria
GTG
His
>WENV170014658
AYSL01003325
149035
Gammaproteobacteria
CCG
Arg
>WENV170014703
AYSL01005909
149035
Gammaproteobacteria
CCG
Arg
>WENV170014740
AYSL01008379
149035
Gammaproteobacteria
CCG
Arg
>WENV170014649
AYSL01002494
147053
Gammaproteobacteria
GTT
Asn
>WENV170014650
AYSL01002494
147053
Gammaproteobacteria
GTT
Asn
>WENV170014632
AYSL01001730
145260
Gammaproteobacteria
CAT
Met
>WENV170014744
AYSL01008713
145260
Gammaproteobacteria
CAT
Met
>WENV170014757
AYSL01009422
145260
Gammaproteobacteria
CAT
Met
>WENV170014721
AYSL01006960
160030
Gammaproteobacteria
GGG
Pro
>WENV170014616
AYSL01001157
236025
Gammaproteobacteria
TTG
Gln
>WENV170014617
AYSL01001157
236025
Gammaproteobacteria
TTG
Gln
>WENV170014618
AYSL01001183
236025
Gammaproteobacteria
TTG
Gln
>WENV170014621
AYSL01001332
236025
Gammaproteobacteria
TTG
Gln
>WENV170014773
AYSL01010527
236025
Gammaproteobacteria
TTG
Gln
>WENV170014620
AYSL01001323
149036
Gammaproteobacteria
CCA
Trp
>WENV170014710
AYSL01006143
16453
Gammaproteobacteria
TGA
Ser
>WENV170014669
AYSL01003909
145261
Gammaproteobacteria
CAT
Met
>WENV170014683
AYSL01004992
16294
Gammaproteobacteria
GGA
Ser
>WENV170014642
AYSL01002181
145485
Gammaproteobacteria
ACG
Arg
>WENV170014755
AYSL01009362
145485
Gammaproteobacteria
ACG
Arg
>WENV170014680
AYSL01004808
412799
Gammaproteobacteria
GCA
Cys
>WENV170014752
AYSL01009061
412799
Gammaproteobacteria
GCA
Cys
>WENV170014657
AYSL01003156
340801
Gammaproteobacteria
CCT
Arg
>WENV170014714
AYSL01006398
340801
Gammaproteobacteria
CCT
Arg
>WENV170014711
AYSL01006143
236027
Gammaproteobacteria
GTT
Asn
>WENV170014760
AYSL01009560
236027
Gammaproteobacteria
GTT
Asn
>WENV170014665
AYSL01003440
411767
Gammaproteobacteria
TCC
Gly
>WENV170014626
AYSL01001435
97031
Gammaproteobacteria
TAG
Leu
>WENV170014633
AYSL01001730
97031
Gammaproteobacteria
TAG
Leu
>WENV170014654
AYSL01002917
97031
Gammaproteobacteria
TAG
Leu
>WENV170014725
AYSL01007324
97031
Gammaproteobacteria
TAG
Leu
>WENV170014769
AYSL01010149
97031
Gammaproteobacteria
TAG
Leu
>WENV170014624
AYSL01001435
97031
Gammaproteobacteria
TAG
Leu
>WENV170014629
AYSL01001568
145487
Gammaproteobacteria
TCT
Arg
>WENV170014651
AYSL01002917
149038
Gammaproteobacteria
TGG
Pro
>WENV170014661
AYSL01003409
149038
Gammaproteobacteria
TGG
Pro
>WENV170014726
AYSL01007324
149038
Gammaproteobacteria
TGG
Pro
>WENV170014763
AYSL01009575
149038
Gammaproteobacteria
TGG
Pro
>WENV170014770
AYSL01010149
149038
Gammaproteobacteria
TGG
Pro
>WENV170014700
AYSL01005798
145490
Gammaproteobacteria
CAT
Met
>WENV170014741
AYSL01008401
59830
Gammaproteobacteria
CAA
Leu
>WENV170014777
AYSL01010788
59830
Gammaproteobacteria
CAA
Leu
>WENV170014691
AYSL01005283
240084
Gammaproteobacteria
GGT
Thr
>WENV170014670
AYSL01003990
10767
Gammaproteobacteria
GCT
Ser
>WENV170014610
AYSL01000572
23442
Gammaproteobacteria
GCT
Ser
>WENV170014655
AYSL01003028
23442
Gammaproteobacteria
GCT
Ser
>WENV170014643
AYSL01002191
158081
Gammaproteobacteria
GAT
Ile
>WENV170014636
AYSL01002016
253713
Gammaproteobacteria
TTC
Glu
>WENV170014656
AYSL01003032
236032
Gammaproteobacteria
GAA
Phe
>WENV170014772
AYSL01010477
236032
Gammaproteobacteria
GAA
Phe
>WENV170014627
AYSL01001493
145491
Gammaproteobacteria
GGG
Pro
>WENV170014663
AYSL01003440
236033
Gammaproteobacteria
TGT
Thr
>WENV170014774
AYSL01010647
59658
Gammaproteobacteria
CAA
Leu
>WENV170014641
AYSL01002105
149037
Gammaproteobacteria
GAC
Val
>WENV170014646
AYSL01002324
149037
Gammaproteobacteria
GAC
Val
>WENV170014677
AYSL01004382
149037
Gammaproteobacteria
GAC
Val
>WENV170014749
AYSL01008994
236034
Gammaproteobacteria
CCT
Arg
>WENV170014697
AYSL01005646
243899
Gammaproteobacteria
TTT
Lys
>WENV170014698
AYSL01005646
243899
Gammaproteobacteria
TTT
Lys
>WENV170014699
AYSL01005646
243899
Gammaproteobacteria
TTT
Lys
>WENV170014686
AYSL01005110
236031
Gammaproteobacteria
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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