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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170015376
AZIG01004594
80917
Alphaproteobacteria
CAG
Leu
>WENV170015443
AZIG01007057
306070
Alphaproteobacteria
CCA
Trp
>WENV170015360
AZIG01004251
113700
Alphaproteobacteria
>WENV170015404
AZIG01006058
113700
Alphaproteobacteria
>WENV170015292
AZIG01000596
176908
Alphaproteobacteria
GTC
Asp
>WENV170015295
AZIG01001053
23671
Alphaproteobacteria
CGA
Ser
>WENV170015419
AZIG01006376
339723
Alphaproteobacteria
>WENV170015311
AZIG01002291
147083
Alphaproteobacteria
GGG
Pro
>WENV170015277
AZIG01000213
339722
Alphaproteobacteria
TTG
Gln
>WENV170015386
AZIG01005097
237740
Alphaproteobacteria
TTT
Lys
>WENV170015313
AZIG01002411
80918
Alphaproteobacteria
GAG
Leu
>WENV170015278
AZIG01000317
147334
Alphaproteobacteria
CAT
Met
>WENV170015401
AZIG01005726
157999
Alphaproteobacteria
TCT
Arg
>WENV170015355
AZIG01003835
113716
Alphaproteobacteria
CAA
Leu
>WENV170015300
AZIG01001292
412279
Alphaproteobacteria
CCC
Gly
>WENV170015303
AZIG01001584
28682
Alphaproteobacteria
GGA
Ser
>WENV170015381
AZIG01005016
23648
Alphaproteobacteria
CGA
Ser
>WENV170015296
AZIG01001124
412477
Alphaproteobacteria
GCA
Cys
>WENV170015393
AZIG01005621
338760
Alphaproteobacteria
GAA
Phe
>WENV170015290
AZIG01000485
338288
Alphaproteobacteria
TTC
Glu
>WENV170015428
AZIG01006534
338288
Alphaproteobacteria
TTC
Glu
>WENV170015382
AZIG01005053
319925
Alphaproteobacteria
TGT
Thr
>WENV170015429
AZIG01006650
147286
Alphaproteobacteria
CGG
Pro
>WENV170015372
AZIG01004516
147088
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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