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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170015399
AZIG01005693
144980
Gammaproteobacteria
CCG
Arg
>WENV170015461
AZIG01007320
23711
Gammaproteobacteria
GGA
Ser
>WENV170015417
AZIG01006305
235452
Gammaproteobacteria
GAA
Phe
>WENV170015405
AZIG01006122
240619
Gammaproteobacteria
TGT
Thr
>WENV170015483
AZIG01008367
51143
Gammaproteobacteria
TGA
Ser
>WENV170015331
AZIG01003155
16446
Gammaproteobacteria
GCT
Ser
>WENV170015472
AZIG01007419
174801
Gammaproteobacteria
TGG
Pro
>WENV170015343
AZIG01003421
279806
Gammaproteobacteria
TGT
Thr
>WENV170015359
AZIG01004225
279806
Gammaproteobacteria
TGT
Thr
>WENV170015452
AZIG01007119
45345
Gammaproteobacteria
GGA
Ser
>WENV170015346
AZIG01003734
426403
Gammaproteobacteria
GCA
Cys
>WENV170015363
AZIG01004287
199268
Gammaproteobacteria
ACG
Arg
>WENV170015375
AZIG01004561
199268
Gammaproteobacteria
ACG
Arg
>WENV170015358
AZIG01004225
238307
Gammaproteobacteria
GAA
Phe
>WENV170015410
AZIG01006167
269152
Gammaproteobacteria
GTG
His
>WENV170015447
AZIG01007111
96066
Gammaproteobacteria
TAA
Leu
>WENV170015400
AZIG01005704
23429
Gammaproteobacteria
GGA
Ser
>WENV170015436
AZIG01006974
148452
Gammaproteobacteria
CCT
Arg
>WENV170015439
AZIG01006975
241136
Gammaproteobacteria
TTG
Gln
>WENV170015333
AZIG01003155
165964
Gammaproteobacteria
ACG
Arg
>WENV170015334
AZIG01003155
165964
Gammaproteobacteria
ACG
Arg
>WENV170015392
AZIG01005460
319100
Gammaproteobacteria
GGT
Thr
>WENV170015335
AZIG01003155
147595
Gammaproteobacteria
CCT
Arg
>WENV170015478
AZIG01007419
411735
Gammaproteobacteria
GCA
Cys
>WENV170015437
AZIG01006974
175964
Gammaproteobacteria
CAT
Met
>WENV170015416
AZIG01006305
59485
Gammaproteobacteria
CAG
Leu
>WENV170015357
AZIG01004210
173617
Gammaproteobacteria
GTC
Asp
>WENV170015468
AZIG01007374
145334
Gammaproteobacteria
CCG
Arg
>WENV170015408
AZIG01006122
239187
Gammaproteobacteria
GGT
Thr
>WENV170015394
AZIG01005638
96065
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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