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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170015808
AZII01011017
113700
Alphaproteobacteria
>WENV170015784
AZII01009104
419996
Alphaproteobacteria
GCA
Cys
>WENV170015794
AZII01009781
419996
Alphaproteobacteria
GCA
Cys
>WENV170015780
AZII01008813
148158
Alphaproteobacteria
ACG
Arg
>WENV170015721
AZII01005169
23672
Alphaproteobacteria
GCT
Ser
>WENV170015728
AZII01005273
23672
Alphaproteobacteria
GCT
Ser
>WENV170015682
AZII01002740
242540
Alphaproteobacteria
TGC
Ala
>WENV170015650
AZII01001129
268365
Alphaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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