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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
68 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170015861
AZIJ01001928
359029
Gammaproteobacteria
GGT
Thr
>WENV170016104
AZIJ01012670
23711
Gammaproteobacteria
GGA
Ser
>WENV170015987
AZIJ01006166
183605
Gammaproteobacteria
CCG
Arg
>WENV170016217
AZIJ01017345
235887
Gammaproteobacteria
GTG
His
>WENV170016289
AZIJ01019234
165036
Gammaproteobacteria
CCA
Trp
>WENV170015914
AZIJ01004146
161961
Gammaproteobacteria
ACG
Arg
>WENV170016306
AZIJ01022968
147918
Gammaproteobacteria
TGG
Pro
>WENV170015913
AZIJ01004145
6971
Gammaproteobacteria
GCT
Ser
>WENV170015921
AZIJ01004315
95985
Gammaproteobacteria
TAG
Leu
>WENV170016011
AZIJ01007777
145368
Gammaproteobacteria
CCT
Arg
>WENV170015964
AZIJ01005706
58822
Gammaproteobacteria
CAA
Leu
>WENV170015915
AZIJ01004164
145367
Gammaproteobacteria
GGG
Pro
>WENV170016238
AZIJ01017841
238035
Gammaproteobacteria
TAC
Val
>WENV170015934
AZIJ01004679
301997
Gammaproteobacteria
TTC
Glu
>WENV170016273
AZIJ01019059
235452
Gammaproteobacteria
GAA
Phe
>WENV170016120
AZIJ01013058
148044
Gammaproteobacteria
GAC
Val
>WENV170016185
AZIJ01015039
148044
Gammaproteobacteria
GAC
Val
>WENV170016286
AZIJ01019205
238431
Gammaproteobacteria
GTT
Asn
>WENV170016045
AZIJ01009965
16446
Gammaproteobacteria
GCT
Ser
>WENV170015860
AZIJ01001928
341109
Gammaproteobacteria
TCC
Gly
>WENV170016178
AZIJ01014587
349672
Gammaproteobacteria
TTG
Gln
>WENV170016179
AZIJ01014587
349672
Gammaproteobacteria
TTG
Gln
>WENV170015928
AZIJ01004478
7018
Gammaproteobacteria
GCT
Ser
>WENV170015872
AZIJ01002550
145366
Gammaproteobacteria
ACG
Arg
>WENV170015873
AZIJ01002550
145366
Gammaproteobacteria
ACG
Arg
>WENV170016232
AZIJ01017707
147122
Gammaproteobacteria
GGG
Pro
>WENV170016269
AZIJ01018913
147122
Gammaproteobacteria
GGG
Pro
>WENV170015896
AZIJ01003394
159514
Gammaproteobacteria
TGG
Pro
>WENV170016173
AZIJ01013913
279806
Gammaproteobacteria
TGT
Thr
>WENV170016253
AZIJ01018414
426403
Gammaproteobacteria
GCA
Cys
>WENV170016209
AZIJ01016630
52727
Gammaproteobacteria
GGA
Ser
>WENV170016278
AZIJ01019141
52727
Gammaproteobacteria
GGA
Ser
>WENV170016094
AZIJ01012402
199268
Gammaproteobacteria
ACG
Arg
>WENV170015911
AZIJ01003864
309581
Gammaproteobacteria
GAA
Phe
>WENV170016186
AZIJ01015104
145237
Gammaproteobacteria
CAT
Met
>WENV170015864
AZIJ01002081
238307
Gammaproteobacteria
GAA
Phe
>WENV170015982
AZIJ01006085
147777
Gammaproteobacteria
TCT
Arg
>WENV170016237
AZIJ01017841
254317
Gammaproteobacteria
TAC
Val
>WENV170016227
AZIJ01017521
269152
Gammaproteobacteria
GTG
His
>WENV170015907
AZIJ01003570
294663
Gammaproteobacteria
TTC
Glu
>WENV170016066
AZIJ01011260
309243
Gammaproteobacteria
GTT
Asn
>WENV170016003
AZIJ01007438
23429
Gammaproteobacteria
GGA
Ser
>WENV170015993
AZIJ01006494
108266
Gammaproteobacteria
GTA
Tyr
>WENV170015994
AZIJ01006494
108266
Gammaproteobacteria
GTA
Tyr
>WENV170016090
AZIJ01012401
108266
Gammaproteobacteria
GTA
Tyr
>WENV170015920
AZIJ01004315
147123
Gammaproteobacteria
CAT
Met
>WENV170015842
AZIJ01000886
235886
Gammaproteobacteria
TTC
Glu
>WENV170015940
AZIJ01004880
235886
Gammaproteobacteria
TTC
Glu
>WENV170015976
AZIJ01006029
412230
Gammaproteobacteria
GCA
Cys
>WENV170015889
AZIJ01003081
45459
Gammaproteobacteria
GGA
Ser
>WENV170015950
AZIJ01005436
243921
Gammaproteobacteria
TTT
Lys
>WENV170015951
AZIJ01005436
243921
Gammaproteobacteria
TTT
Lys
>WENV170016157
AZIJ01013380
243921
Gammaproteobacteria
TTT
Lys
>WENV170016158
AZIJ01013380
243921
Gammaproteobacteria
TTT
Lys
>WENV170015983
AZIJ01006085
268904
Gammaproteobacteria
GTG
His
>WENV170016014
AZIJ01008062
237421
Gammaproteobacteria
TGT
Thr
>WENV170016208
AZIJ01016514
182592
Gammaproteobacteria
GAC
Val
>WENV170016193
AZIJ01015467
162567
Gammaproteobacteria
CAT
Met
>WENV170016010
AZIJ01007605
245151
Gammaproteobacteria
GTG
His
>WENV170016089
AZIJ01012401
279219
Gammaproteobacteria
TGT
Thr
>WENV170016116
AZIJ01012897
175964
Gammaproteobacteria
CAT
Met
>WENV170016095
AZIJ01012444
150297
Gammaproteobacteria
TCT
Arg
>WENV170016258
AZIJ01018495
24403
Gammaproteobacteria
TGA
Ser
>WENV170015829
AZIJ01000596
95603
Gammaproteobacteria
TAG
Leu
>WENV170015831
AZIJ01000596
95603
Gammaproteobacteria
TAG
Leu
>WENV170015882
AZIJ01002803
173617
Gammaproteobacteria
GTC
Asp
>WENV170016240
AZIJ01017857
152286
Gammaproteobacteria
GAC
Val
>WENV170015825
AZIJ01000329
145334
Gammaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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