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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV082430
BAAV01009598
196621
Bacillota
GTC
Asp
>WENV082459
BAAV01011331
196621
Bacillota
GTC
Asp
>WENV082518
BAAV01015145
196621
Bacillota
GTC
Asp
>WENV082571
BAAV01019127
309417
Bacillota
GGC
Ala
>WENV082595
BAAV01023168
158247
Bacillota
>WENV082379
BAAV01005517
144612
Bacillota
TCT
Arg
>WENV082452
BAAV01011269
267649
Bacillota
TAC
Val
>WENV082592
BAAV01023053
235098
Bacillota
GAC
Val
>WENV082441
BAAV01010401
338152
Bacillota
TTC
Glu
>WENV082197
BAAV01000221
144577
Bacillota
GAT
Ile
>WENV082218
BAAV01000571
144577
Bacillota
GAT
Ile
>WENV082462
BAAV01011386
144577
Bacillota
GAT
Ile
>WENV082565
BAAV01018138
144577
Bacillota
GAT
Ile
>WENV082332
BAAV01003447
304022
Bacillota
GCC
Gly
>WENV082445
BAAV01011088
304022
Bacillota
GCC
Gly
>WENV082520
BAAV01015145
304022
Bacillota
GCC
Gly
>WENV082706
BAAV01035395
246023
Bacillota
TGC
Ala
>WENV082269
BAAV01001391
307003
Bacillota
TGC
Ala
>WENV082283
BAAV01001815
307003
Bacillota
TGC
Ala
>WENV082409
BAAV01007702
193585
Bacillota
CGG
Pro
>WENV082331
BAAV01003406
338147
Bacillota
CTC
Glu
>WENV082376
BAAV01005300
16820
Bacillota
GCT
Ser
>WENV082637
BAAV01028655
235137
Bacillota
TGC
Ala
>WENV082322
BAAV01003098
152512
Bacillota
CCT
Arg
>WENV082456
BAAV01011269
198770
Bacillota
GTC
Asp
>WENV082251
BAAV01000939
239076
Bacillota
GAA
Phe
>WENV082290
BAAV01001961
342736
Bacillota
TTG
Gln
>WENV082248
BAAV01000939
37437
Bacillota
TAA
Leu
>WENV082539
BAAV01016182
37437
Bacillota
TAA
Leu
>WENV082211
BAAV01000442
235079
Bacillota
GAA
Phe
>WENV082519
BAAV01015145
235079
Bacillota
GAA
Phe
>WENV082279
BAAV01001709
296878
Bacillota
GTT
Asn
>WENV082219
BAAV01000571
235087
Bacillota
TGC
Ala
>WENV082558
BAAV01017999
199366
Bacillota
CAT
Met
>WENV082272
BAAV01001506
152513
Bacillota
GAC
Val
>WENV082273
BAAV01001506
152513
Bacillota
GAC
Val
>WENV082244
BAAV01000939
81382
Bacillota
GAG
Leu
>WENV082246
BAAV01000939
81382
Bacillota
GAG
Leu
>WENV082535
BAAV01016182
81382
Bacillota
GAG
Leu
>WENV082537
BAAV01016182
81382
Bacillota
GAG
Leu
>WENV082287
BAAV01001880
338149
Bacillota
CTC
Glu
>WENV082625
BAAV01028036
338149
Bacillota
CTC
Glu
>WENV082225
BAAV01000629
287000
Bacillota
GTT
Asn
>WENV082329
BAAV01003348
152149
Bacillota
GTG
His
>WENV082705
BAAV01035395
201704
Bacillota
GAT
Ile
>WENV082213
BAAV01000442
235078
Bacillota
TAC
Val
>WENV082553
BAAV01017548
412387
Bacillota
GCA
Cys
>WENV082690
BAAV01033287
412387
Bacillota
GCA
Cys
>WENV082294
BAAV01001993
248683
Bacillota
TTT
Lys
>WENV082297
BAAV01002148
235095
Bacillota
GGT
Thr
>WENV082429
BAAV01009598
235095
Bacillota
GGT
Thr
>WENV082460
BAAV01011331
235095
Bacillota
GGT
Thr
>WENV082295
BAAV01001993
344183
Bacillota
CTG
Gln
>WENV082214
BAAV01000448
96694
Bacillota
TAG
Leu
>WENV082253
BAAV01000939
239079
Bacillota
TAC
Val
>WENV082368
BAAV01004821
239079
Bacillota
TAC
Val
>WENV082292
BAAV01001993
304759
Bacillota
TAC
Val
>WENV082693
BAAV01033910
411549
Bacillota
TTG
Gln
>WENV082293
BAAV01001993
243398
Bacillota
TTC
Glu
>WENV082242
BAAV01000897
235877
Bacillota
TGC
Ala
>WENV082374
BAAV01005123
37588
Bacillota
TGA
Ser
>WENV082310
BAAV01002759
152051
Bacillota
ACG
Arg
>WENV082391
BAAV01006325
298620
Bacillota
CAT
Met
>WENV082633
BAAV01028453
241432
Bacillota
TGT
Thr
>WENV082254
BAAV01000939
241526
Bacillota
CTT
Lys
>WENV082501
BAAV01014167
199936
Bacillota
GAT
Ile
>WENV082275
BAAV01001600
144583
Bacillota
ACG
Arg
>WENV082709
BAAV01035858
144672
Bacillota
TCT
Arg
>WENV082458
BAAV01011331
235171
Bacillota
CCA
Trp
>WENV082630
BAAV01028453
238974
Bacillota
GAA
Phe
>WENV082234
BAAV01000771
272992
Bacillota
CTT
Lys
>WENV082286
BAAV01001880
272992
Bacillota
CTT
Lys
>WENV082603
BAAV01024675
272992
Bacillota
CTT
Lys
>WENV082624
BAAV01028036
272992
Bacillota
CTT
Lys
>WENV082268
BAAV01001362
299139
Bacillota
TGC
Ala
>WENV082700
BAAV01034872
299139
Bacillota
TGC
Ala
>WENV082686
BAAV01032787
144594
Bacillota
CAC
Val
>WENV082222
BAAV01000614
338127
Bacillota
TTG
Gln
>WENV082666
BAAV01030934
152018
Bacillota
CCT
Arg
>WENV082363
BAAV01004519
272488
Bacillota
GAA
Phe
>WENV082247
BAAV01000939
81598
Bacillota
CAG
Leu
>WENV082538
BAAV01016182
81598
Bacillota
CAG
Leu
>WENV082551
BAAV01017258
413179
Bacillota
CCC
Gly
>WENV082321
BAAV01003058
338128
Bacillota
TTC
Glu
>WENV082488
BAAV01012605
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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