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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
128 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV083105
BAAX01002561
144612
Bacillota
TCT
Arg
>WENV083196
BAAX01006108
267649
Bacillota
TAC
Val
>WENV083524
BAAX01031531
267649
Bacillota
TAC
Val
>WENV083078
BAAX01001651
246392
Bacillota
GTT
Asn
>WENV083277
BAAX01010820
246392
Bacillota
GTT
Asn
>WENV083118
BAAX01002783
44854
Bacillota
TGA
Ser
>WENV083131
BAAX01003138
44854
Bacillota
TGA
Ser
>WENV083019
BAAX01000383
37549
Bacillota
TAA
Leu
>WENV083004
BAAX01000131
144577
Bacillota
GAT
Ile
>WENV083056
BAAX01000905
144577
Bacillota
GAT
Ile
>WENV083430
BAAX01023277
144577
Bacillota
GAT
Ile
>WENV083015
BAAX01000331
238910
Bacillota
CTT
Lys
>WENV083000
BAAX01000062
243119
Bacillota
CTT
Lys
>WENV083347
BAAX01015784
338147
Bacillota
CTC
Glu
>WENV083408
BAAX01020755
235150
Bacillota
TGC
Ala
>WENV083071
BAAX01001338
152047
Bacillota
GGG
Pro
>WENV083513
BAAX01030330
16820
Bacillota
GCT
Ser
>WENV083108
BAAX01002579
235137
Bacillota
TGC
Ala
>WENV083416
BAAX01021879
235137
Bacillota
TGC
Ala
>WENV083085
BAAX01001881
152459
Bacillota
GTC
Asp
>WENV083427
BAAX01022664
152459
Bacillota
GTC
Asp
>WENV083109
BAAX01002581
144668
Bacillota
GTC
Asp
>WENV082992
BAAX01000032
235091
Bacillota
CTT
Lys
>WENV082994
BAAX01000042
235091
Bacillota
CTT
Lys
>WENV083181
BAAX01005616
235091
Bacillota
CTT
Lys
>WENV083476
BAAX01027515
235091
Bacillota
CTT
Lys
>WENV083378
BAAX01016859
44859
Bacillota
AAG
Leu
>WENV083209
BAAX01006298
235117
Bacillota
TAC
Val
>WENV083344
BAAX01015668
235117
Bacillota
TAC
Val
>WENV083371
BAAX01016542
235117
Bacillota
TAC
Val
>WENV083433
BAAX01023296
235117
Bacillota
TAC
Val
>WENV083458
BAAX01025185
235117
Bacillota
TAC
Val
>WENV082984
BAAX01000029
239076
Bacillota
GAA
Phe
>WENV083192
BAAX01005889
10943
Bacillota
GGA
Ser
>WENV083099
BAAX01002436
342736
Bacillota
TTG
Gln
>WENV082981
BAAX01000029
37437
Bacillota
TAA
Leu
>WENV083207
BAAX01006298
235079
Bacillota
GAA
Phe
>WENV083346
BAAX01015668
235079
Bacillota
GAA
Phe
>WENV083369
BAAX01016542
235079
Bacillota
GAA
Phe
>WENV083460
BAAX01025185
235079
Bacillota
GAA
Phe
>WENV083017
BAAX01000383
340265
Bacillota
GCC
Gly
>WENV083278
BAAX01010820
340265
Bacillota
GCC
Gly
>WENV083003
BAAX01000131
235087
Bacillota
TGC
Ala
>WENV083055
BAAX01000905
235087
Bacillota
TGC
Ala
>WENV083431
BAAX01023277
235087
Bacillota
TGC
Ala
>WENV083405
BAAX01020306
173314
Bacillota
GAT
Ile
>WENV083148
BAAX01003760
152513
Bacillota
GAC
Val
>WENV083149
BAAX01003760
152513
Bacillota
GAC
Val
>WENV082977
BAAX01000029
81382
Bacillota
GAG
Leu
>WENV082979
BAAX01000029
81382
Bacillota
GAG
Leu
>WENV082993
BAAX01000032
338149
Bacillota
CTC
Glu
>WENV083477
BAAX01027515
338149
Bacillota
CTC
Glu
>WENV083201
BAAX01006226
245298
Bacillota
CGG
Pro
>WENV083426
BAAX01022664
81644
Bacillota
GAG
Leu
>WENV083464
BAAX01025842
413152
Bacillota
TCC
Gly
>WENV083528
BAAX01032220
81373
Bacillota
GTA
Tyr
>WENV083145
BAAX01003686
153911
Bacillota
GAT
Ile
>WENV083379
BAAX01016860
100326
Bacillota
GTA
Tyr
>WENV083439
BAAX01023789
144610
Bacillota
GTG
His
>WENV083200
BAAX01006226
411547
Bacillota
CTG
Gln
>WENV083258
BAAX01009142
411547
Bacillota
CTG
Gln
>WENV083119
BAAX01002783
4624
Bacillota
GCT
Ser
>WENV083130
BAAX01003138
4624
Bacillota
GCT
Ser
>WENV083125
BAAX01002922
412387
Bacillota
GCA
Cys
>WENV083250
BAAX01008340
412387
Bacillota
GCA
Cys
>WENV083275
BAAX01010820
248683
Bacillota
TTT
Lys
>WENV083178
BAAX01005544
243399
Bacillota
CCA
Trp
>WENV083086
BAAX01001883
235095
Bacillota
GGT
Thr
>WENV083132
BAAX01003305
235095
Bacillota
GGT
Thr
>WENV083174
BAAX01005487
235095
Bacillota
GGT
Thr
>WENV083225
BAAX01007813
235095
Bacillota
GGT
Thr
>WENV083425
BAAX01022454
235095
Bacillota
GGT
Thr
>WENV083276
BAAX01010820
344183
Bacillota
CTG
Gln
>WENV083018
BAAX01000383
419945
Bacillota
GCA
Cys
>WENV083005
BAAX01000170
241471
Bacillota
TGC
Ala
>WENV083107
BAAX01002563
241471
Bacillota
TGC
Ala
>WENV083326
BAAX01014130
419639
Bacillota
GCA
Cys
>WENV083042
BAAX01000660
96694
Bacillota
TAG
Leu
>WENV082986
BAAX01000029
239079
Bacillota
TAC
Val
>WENV083473
BAAX01027113
411549
Bacillota
TTG
Gln
>WENV083077
BAAX01001651
243398
Bacillota
TTC
Glu
>WENV083274
BAAX01010820
243398
Bacillota
TTC
Glu
>WENV083070
BAAX01001334
37588
Bacillota
TGA
Ser
>WENV083006
BAAX01000170
152019
Bacillota
GAT
Ile
>WENV083264
BAAX01009837
148188
Bacillota
CCG
Arg
>WENV083541
BAAX01035151
148188
Bacillota
CCG
Arg
>WENV083120
BAAX01002873
80612
Bacillota
GTA
Tyr
>WENV083298
BAAX01012334
80612
Bacillota
GTA
Tyr
>WENV083123
BAAX01002910
152051
Bacillota
ACG
Arg
>WENV083407
BAAX01020708
235124
Bacillota
TGG
Pro
>WENV082987
BAAX01000029
241526
Bacillota
CTT
Lys
>WENV083081
BAAX01001769
241526
Bacillota
CTT
Lys
>WENV083082
BAAX01001769
241526
Bacillota
CTT
Lys
>WENV083117
BAAX01002779
338129
Bacillota
TGT
Thr
>WENV083279
BAAX01010827
338129
Bacillota
TGT
Thr
>WENV083297
BAAX01012334
338129
Bacillota
TGT
Thr
>WENV083031
BAAX01000492
144583
Bacillota
ACG
Arg
>WENV083101
BAAX01002539
144583
Bacillota
ACG
Arg
>WENV083288
BAAX01011531
144583
Bacillota
ACG
Arg
>WENV083388
BAAX01017572
247734
Bacillota
TGC
Ala
>WENV083134
BAAX01003305
235171
Bacillota
CCA
Trp
>WENV083311
BAAX01013803
235113
Bacillota
GAA
Phe
>WENV083094
BAAX01002405
243098
Bacillota
GGT
Thr
>WENV083486
BAAX01028002
243098
Bacillota
GGT
Thr
>WENV083103
BAAX01002561
58712
Bacillota
CAG
Leu
>WENV083265
BAAX01009901
58712
Bacillota
CAG
Leu
>WENV083172
BAAX01005195
241638
Bacillota
GTG
His
>WENV083272
BAAX01010602
245296
Bacillota
CCC
Gly
>WENV082971
BAAX01000007
239078
Bacillota
TTT
Lys
>WENV083325
BAAX01014130
344240
Bacillota
GCC
Gly
>WENV083313
BAAX01013803
95563
Bacillota
GTA
Tyr
>WENV083319
BAAX01013952
338127
Bacillota
TTG
Gln
>WENV082980
BAAX01000029
81598
Bacillota
CAG
Leu
>WENV083206
BAAX01006298
249259
Bacillota
GCC
Gly
>WENV083210
BAAX01006298
249259
Bacillota
GCC
Gly
>WENV083343
BAAX01015668
249259
Bacillota
GCC
Gly
>WENV083368
BAAX01016542
249259
Bacillota
GCC
Gly
>WENV083372
BAAX01016542
249259
Bacillota
GCC
Gly
>WENV083432
BAAX01023296
249259
Bacillota
GCC
Gly
>WENV083457
BAAX01025185
249259
Bacillota
GCC
Gly
>WENV083461
BAAX01025185
249259
Bacillota
GCC
Gly
>WENV083500
BAAX01029119
238857
Bacillota
CCA
Trp
>WENV083501
BAAX01029120
238857
Bacillota
CCA
Trp
>WENV083516
BAAX01030544
338131
Bacillota
GCC
Gly
>WENV083091
BAAX01002192
338128
Bacillota
TTC
Glu
>WENV083167
BAAX01005012
338128
Bacillota
TTC
Glu
>WENV083421
BAAX01022175
338128
Bacillota
TTC
Glu
>WENV083324
BAAX01014130
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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