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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV083284
BAAX01011345
235102
Bacteroidota
CGT
Thr
>WENV083349
BAAX01016042
146761
Bacteroidota
GAT
Ile
>WENV083113
BAAX01002614
237796
Bacteroidota
CGT
Thr
>WENV083511
BAAX01029898
237796
Bacteroidota
CGT
Thr
>WENV083260
BAAX01009567
147147
Bacteroidota
GTG
His
>WENV083199
BAAX01006217
353373
Bacteroidota
>WENV083385
BAAX01017456
146800
Bacteroidota
>WENV083137
BAAX01003389
238121
Bacteroidota
CTT
Lys
>WENV083138
BAAX01003389
238121
Bacteroidota
CTT
Lys
>WENV083136
BAAX01003389
45423
Bacteroidota
TGA
Ser
>WENV082996
BAAX01000049
37076
Bacteroidota
TAA
Leu
>WENV083040
BAAX01000657
37076
Bacteroidota
TAA
Leu
>WENV083540
BAAX01035086
37076
Bacteroidota
TAA
Leu
>WENV083023
BAAX01000442
344769
Bacteroidota
CTC
Glu
>WENV083024
BAAX01000442
344769
Bacteroidota
CTC
Glu
>WENV083084
BAAX01001811
415558
Bacteroidota
TTG
Gln
>WENV083044
BAAX01000692
419272
Bacteroidota
CTG
Gln
>WENV083436
BAAX01023628
146762
Bacteroidota
TGG
Pro
>WENV083437
BAAX01023628
146762
Bacteroidota
TGG
Pro
>WENV083395
BAAX01018275
151960
Bacteroidota
GGC
Ala
>WENV083182
BAAX01005705
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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