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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV083885
BAAY01013394
235146
Actinomycetota
CGT
Thr
>WENV083891
BAAY01013826
119475
Actinomycetota
TAA
Leu
>WENV083920
BAAY01017304
235153
Actinomycetota
CCT
Arg
>WENV083921
BAAY01017305
235153
Actinomycetota
CCT
Arg
>WENV083666
BAAY01002196
144589
Actinomycetota
ACG
Arg
>WENV083667
BAAY01002196
144589
Actinomycetota
ACG
Arg
>WENV083629
BAAY01001139
37070
Actinomycetota
CGA
Ser
>WENV083730
BAAY01004428
144600
Actinomycetota
TGG
Pro
>WENV083602
BAAY01000614
235092
Actinomycetota
CCG
Arg
>WENV083639
BAAY01001313
16219
Actinomycetota
GCT
Ser
>WENV084045
BAAY01029919
235174
Actinomycetota
TGC
Ala
>WENV083682
BAAY01002815
235101
Actinomycetota
TTT
Lys
>WENV083946
BAAY01020435
235101
Actinomycetota
TTT
Lys
>WENV083835
BAAY01010946
144625
Actinomycetota
GTC
Asp
>WENV083850
BAAY01011623
144625
Actinomycetota
GTC
Asp
>WENV083859
BAAY01012137
44855
Actinomycetota
TGA
Ser
>WENV083856
BAAY01011977
16223
Actinomycetota
GAG
Leu
>WENV083686
BAAY01003337
144593
Actinomycetota
TAT
Ile
>WENV083706
BAAY01004146
144700
Actinomycetota
CAT
Met
>WENV083959
BAAY01021603
144636
Actinomycetota
GAT
Ile
>WENV083961
BAAY01021603
144636
Actinomycetota
GAT
Ile
>WENV083840
BAAY01011216
338148
Actinomycetota
CTG
Gln
>WENV083847
BAAY01011433
338148
Actinomycetota
CTG
Gln
>WENV084029
BAAY01028897
338148
Actinomycetota
CTG
Gln
>WENV083897
BAAY01014273
235148
Actinomycetota
GTT
Asn
>WENV083985
BAAY01025632
235148
Actinomycetota
GTT
Asn
>WENV083787
BAAY01007400
338139
Actinomycetota
GTT
Asn
>WENV083788
BAAY01007400
338139
Actinomycetota
GTT
Asn
>WENV083938
BAAY01019788
411554
Actinomycetota
CCC
Gly
>WENV083749
BAAY01005286
113601
Actinomycetota
TAG
Leu
>WENV083694
BAAY01003601
144595
Actinomycetota
CAA
Leu
>WENV083905
BAAY01015769
235149
Actinomycetota
CCT
Arg
>WENV083750
BAAY01005286
235121
Actinomycetota
CGT
Thr
>WENV083958
BAAY01021493
144635
Actinomycetota
TGG
Pro
>WENV083603
BAAY01000628
44851
Actinomycetota
TGA
Ser
>WENV083789
BAAY01007494
16222
Actinomycetota
GAG
Leu
>WENV084044
BAAY01029919
235173
Actinomycetota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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