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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV085457
BABD01000043
235097
Bacteroidota
TTT
Lys
>WENV085524
BABD01000500
235097
Bacteroidota
TTT
Lys
>WENV085860
BABD01021529
235097
Bacteroidota
TTT
Lys
>WENV085696
BABD01006818
146761
Bacteroidota
GAT
Ile
>WENV085699
BABD01006884
126965
Bacteroidota
GGG
Pro
>WENV085871
BABD01023497
153993
Bacteroidota
GAT
Ile
>WENV085572
BABD01001207
338486
Bacteroidota
CAT
Met
>WENV085937
BABD01036206
338486
Bacteroidota
CAT
Met
>WENV085678
BABD01005476
237247
Bacteroidota
TTT
Lys
>WENV085823
BABD01017677
338124
Bacteroidota
CCG
Arg
>WENV085479
BABD01000182
338132
Bacteroidota
GCA
Cys
>WENV085480
BABD01000182
338132
Bacteroidota
GCA
Cys
>WENV085722
BABD01008256
338132
Bacteroidota
GCA
Cys
>WENV085945
BABD01036420
193809
Bacteroidota
CAT
Met
>WENV085614
BABD01002369
144933
Bacteroidota
TCT
Arg
>WENV085461
BABD01000065
235207
Bacteroidota
CAT
Met
>WENV085460
BABD01000065
235207
Bacteroidota
CAT
Met
>WENV085698
BABD01006878
80607
Bacteroidota
GTA
Tyr
>WENV085495
BABD01000332
113604
Bacteroidota
>WENV085498
BABD01000332
113604
Bacteroidota
>WENV085674
BABD01005071
95875
Bacteroidota
TAG
Leu
>WENV085470
BABD01000107
44852
Bacteroidota
TAA
Leu
>WENV085897
BABD01030117
44852
Bacteroidota
TAA
Leu
>WENV085467
BABD01000094
150485
Bacteroidota
GTT
Asn
>WENV085468
BABD01000094
150485
Bacteroidota
GTT
Asn
>WENV085469
BABD01000094
150485
Bacteroidota
GTT
Asn
>WENV085476
BABD01000174
50727
Bacteroidota
TGA
Ser
>WENV085478
BABD01000174
50727
Bacteroidota
TGA
Ser
>WENV085490
BABD01000219
50727
Bacteroidota
TGA
Ser
>WENV085670
BABD01004632
50727
Bacteroidota
TGA
Ser
>WENV085593
BABD01001615
132360
Bacteroidota
GGG
Pro
>WENV085546
BABD01000638
425638
Bacteroidota
CTG
Gln
>WENV085655
BABD01003880
185921
Bacteroidota
GTC
Asp
>WENV085776
BABD01011786
185921
Bacteroidota
GTC
Asp
>WENV085541
BABD01000602
16224
Bacteroidota
GGA
Ser
>WENV085908
BABD01031657
16220
Bacteroidota
GGA
Ser
>WENV085764
BABD01010042
338125
Bacteroidota
CCT
Arg
>WENV085732
BABD01009097
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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