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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
125 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV085987
BABE01000152
235146
Actinomycetota
CGT
Thr
>WENV086255
BABE01018281
235146
Actinomycetota
CGT
Thr
>WENV085962
BABE01000058
235347
Actinomycetota
GGC
Ala
>WENV085963
BABE01000058
235347
Actinomycetota
GGC
Ala
>WENV086127
BABE01007016
144589
Actinomycetota
ACG
Arg
>WENV085978
BABE01000105
201717
Actinomycetota
CTT
Lys
>WENV086050
BABE01001300
147155
Actinomycetota
GTC
Asp
>WENV085954
BABE01000032
144600
Actinomycetota
TGG
Pro
>WENV086125
BABE01006686
144600
Actinomycetota
TGG
Pro
>WENV086147
BABE01009212
144600
Actinomycetota
TGG
Pro
>WENV086181
BABE01012157
144600
Actinomycetota
TGG
Pro
>WENV086242
BABE01016724
144600
Actinomycetota
TGG
Pro
>WENV086256
BABE01018307
144600
Actinomycetota
TGG
Pro
>WENV085996
BABE01000173
235194
Actinomycetota
GTG
His
>WENV085989
BABE01000154
273786
Actinomycetota
CGT
Thr
>WENV086112
BABE01006396
158720
Actinomycetota
ACG
Arg
>WENV086113
BABE01006396
158720
Actinomycetota
ACG
Arg
>WENV086126
BABE01007016
158720
Actinomycetota
ACG
Arg
>WENV086130
BABE01007515
158720
Actinomycetota
ACG
Arg
>WENV086163
BABE01010676
158720
Actinomycetota
ACG
Arg
>WENV086164
BABE01010676
158720
Actinomycetota
ACG
Arg
>WENV086177
BABE01011844
158720
Actinomycetota
ACG
Arg
>WENV086178
BABE01011844
158720
Actinomycetota
ACG
Arg
>WENV086190
BABE01012788
158720
Actinomycetota
ACG
Arg
>WENV086191
BABE01012788
158720
Actinomycetota
ACG
Arg
>WENV086212
BABE01014926
158720
Actinomycetota
ACG
Arg
>WENV086213
BABE01014926
158720
Actinomycetota
ACG
Arg
>WENV086230
BABE01015840
158720
Actinomycetota
ACG
Arg
>WENV086253
BABE01017949
158720
Actinomycetota
ACG
Arg
>WENV086047
BABE01001264
237816
Actinomycetota
GGT
Thr
>WENV086052
BABE01001467
304559
Actinomycetota
GCC
Gly
>WENV085950
BABE01000005
411601
Actinomycetota
CCC
Gly
>WENV086095
BABE01003090
411601
Actinomycetota
CCC
Gly
>WENV085985
BABE01000142
144826
Actinomycetota
GGG
Pro
>WENV086098
BABE01003190
144826
Actinomycetota
GGG
Pro
>WENV085953
BABE01000007
23370
Actinomycetota
GCT
Ser
>WENV085976
BABE01000099
23370
Actinomycetota
GCT
Ser
>WENV085957
BABE01000046
174149
Actinomycetota
GAT
Ile
>WENV085977
BABE01000103
338239
Actinomycetota
TTC
Glu
>WENV086263
BABE01018981
338239
Actinomycetota
TTC
Glu
>WENV086045
BABE01001244
147157
Actinomycetota
TAC
Val
>WENV085958
BABE01000046
235174
Actinomycetota
TGC
Ala
>WENV085975
BABE01000095
121510
Actinomycetota
TAA
Leu
>WENV085967
BABE01000065
356045
Actinomycetota
GAC
Val
>WENV085993
BABE01000169
356045
Actinomycetota
GAC
Val
>WENV086137
BABE01008626
356045
Actinomycetota
GAC
Val
>WENV086166
BABE01010893
356045
Actinomycetota
GAC
Val
>WENV086204
BABE01013777
356045
Actinomycetota
GAC
Val
>WENV086217
BABE01015209
356045
Actinomycetota
GAC
Val
>WENV086246
BABE01017324
356045
Actinomycetota
GAC
Val
>WENV085960
BABE01000055
44855
Actinomycetota
TGA
Ser
>WENV085968
BABE01000065
235199
Actinomycetota
CAC
Val
>WENV085992
BABE01000169
235199
Actinomycetota
CAC
Val
>WENV086138
BABE01008626
235199
Actinomycetota
CAC
Val
>WENV086205
BABE01013777
235199
Actinomycetota
CAC
Val
>WENV086218
BABE01015209
235199
Actinomycetota
CAC
Val
>WENV086245
BABE01017324
235199
Actinomycetota
CAC
Val
>WENV085973
BABE01000076
44862
Actinomycetota
CGA
Ser
>WENV085997
BABE01000174
44862
Actinomycetota
CGA
Ser
>WENV086011
BABE01000377
313386
Actinomycetota
CGT
Thr
>WENV086108
BABE01005562
313386
Actinomycetota
CGT
Thr
>WENV086180
BABE01012052
435035
Actinomycetota
TCC
Gly
>WENV085961
BABE01000058
413665
Actinomycetota
TTG
Gln
>WENV086106
BABE01004996
413665
Actinomycetota
TTG
Gln
>WENV085972
BABE01000071
254857
Actinomycetota
CCG
Arg
>WENV086241
BABE01016344
144700
Actinomycetota
CAT
Met
>WENV086219
BABE01015285
144700
Actinomycetota
CAT
Met
>WENV086200
BABE01013461
144700
Actinomycetota
CAT
Met
>WENV086173
BABE01011459
144700
Actinomycetota
CAT
Met
>WENV086144
BABE01009175
144700
Actinomycetota
CAT
Met
>WENV086133
BABE01008000
144700
Actinomycetota
CAT
Met
>WENV086114
BABE01006519
144700
Actinomycetota
CAT
Met
>WENV086105
BABE01004743
144700
Actinomycetota
CAT
Met
>WENV085952
BABE01000007
144700
Actinomycetota
CAT
Met
>WENV085964
BABE01000061
295695
Actinomycetota
CTC
Glu
>WENV086139
BABE01008686
295695
Actinomycetota
CTC
Glu
>WENV085965
BABE01000061
338148
Actinomycetota
CTG
Gln
>WENV085982
BABE01000118
235148
Actinomycetota
GTT
Asn
>WENV085983
BABE01000118
235148
Actinomycetota
GTT
Asn
>WENV086054
BABE01001488
289966
Actinomycetota
ACG
Arg
>WENV085956
BABE01000040
53078
Actinomycetota
GGA
Ser
>WENV086073
BABE01001773
421345
Actinomycetota
CCC
Gly
>WENV085970
BABE01000068
144825
Actinomycetota
CAT
Met
>WENV086244
BABE01016856
237815
Actinomycetota
CTT
Lys
>WENV086010
BABE01000275
237808
Actinomycetota
TGC
Ala
>WENV085998
BABE01000179
235348
Actinomycetota
CCT
Arg
>WENV086087
BABE01002734
235348
Actinomycetota
CCT
Arg
>WENV085988
BABE01000154
113601
Actinomycetota
TAG
Leu
>WENV086012
BABE01000377
113601
Actinomycetota
TAG
Leu
>WENV086107
BABE01005562
113601
Actinomycetota
TAG
Leu
>WENV085990
BABE01000155
144595
Actinomycetota
CAA
Leu
>WENV086109
BABE01005737
144595
Actinomycetota
CAA
Leu
>WENV086136
BABE01008527
144595
Actinomycetota
CAA
Leu
>WENV086146
BABE01009185
144595
Actinomycetota
CAA
Leu
>WENV086231
BABE01015998
144595
Actinomycetota
CAA
Leu
>WENV086049
BABE01001300
147156
Actinomycetota
GAA
Phe
>WENV086032
BABE01000832
237804
Actinomycetota
TGT
Thr
>WENV086031
BABE01000797
80622
Actinomycetota
CAG
Leu
>WENV086111
BABE01006177
80622
Actinomycetota
CAG
Leu
>WENV086135
BABE01008484
80622
Actinomycetota
CAG
Leu
>WENV086148
BABE01009314
80622
Actinomycetota
CAG
Leu
>WENV086159
BABE01010235
80622
Actinomycetota
CAG
Leu
>WENV086174
BABE01011482
80622
Actinomycetota
CAG
Leu
>WENV086184
BABE01012314
80622
Actinomycetota
CAG
Leu
>WENV086264
BABE01019053
80622
Actinomycetota
CAG
Leu
>WENV086048
BABE01001264
338489
Actinomycetota
CAT
Met
>WENV086140
BABE01008749
147734
Actinomycetota
GTC
Asp
>WENV086175
BABE01011652
147734
Actinomycetota
GTC
Asp
>WENV086268
BABE01020177
147734
Actinomycetota
GTC
Asp
>WENV085986
BABE01000144
16222
Actinomycetota
GAG
Leu
>WENV085980
BABE01000109
243162
Actinomycetota
GTT
Asn
>WENV086079
BABE01002156
243162
Actinomycetota
GTT
Asn
>WENV085955
BABE01000033
144660
Actinomycetota
TAC
Val
>WENV086084
BABE01002546
237803
Actinomycetota
CGT
Thr
>WENV085951
BABE01000007
95593
Actinomycetota
>WENV086104
BABE01004743
95593
Actinomycetota
>WENV086115
BABE01006519
95593
Actinomycetota
>WENV086134
BABE01008000
95593
Actinomycetota
>WENV086145
BABE01009175
95593
Actinomycetota
>WENV086172
BABE01011459
95593
Actinomycetota
>WENV086201
BABE01013461
95593
Actinomycetota
>WENV086220
BABE01015285
95593
Actinomycetota
>WENV086240
BABE01016344
95593
Actinomycetota
>WENV085981
BABE01000114
144823
Actinomycetota
TCT
Arg
>WENV086110
BABE01005917
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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