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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV086346
BABF01000642
163526
Gammaproteobacteria
TCT
Arg
>WENV086538
BABF01014974
163526
Gammaproteobacteria
TCT
Arg
>WENV086366
BABF01001161
254253
Gammaproteobacteria
TGT
Thr
>WENV086367
BABF01001161
338240
Gammaproteobacteria
>WENV086430
BABF01003245
277942
Gammaproteobacteria
TTT
Lys
>WENV086300
BABF01000275
342830
Gammaproteobacteria
>WENV086301
BABF01000275
342830
Gammaproteobacteria
>WENV086341
BABF01000636
350542
Gammaproteobacteria
>WENV086332
BABF01000556
182832
Gammaproteobacteria
GTC
Asp
>WENV086339
BABF01000609
182832
Gammaproteobacteria
GTC
Asp
>WENV086436
BABF01003596
182832
Gammaproteobacteria
GTC
Asp
>WENV086348
BABF01000642
254774
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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