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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170022715
BCQK01039521
237816
Actinomycetota
GGT
Thr
>WENV170022875
BCQK01066567
413688
Actinomycetota
CCC
Gly
>WENV170022960
BCQK01087460
415620
Actinomycetota
TCC
Gly
>WENV170022771
BCQK01047121
147348
Actinomycetota
TAA
Leu
>WENV170023011
BCQK01100849
237808
Actinomycetota
TGC
Ala
>WENV170022716
BCQK01039521
338489
Actinomycetota
CAT
Met
>WENV170023015
BCQK01100968
237803
Actinomycetota
CGT
Thr
>WENV170022703
BCQK01037935
45149
Actinomycetota
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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