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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170022839
BCQK01059019
339737
Alphaproteobacteria
GAC
Val
>WENV170022883
BCQK01069449
419488
Alphaproteobacteria
TCC
Gly
>WENV170022307
BCQK01004572
237739
Alphaproteobacteria
CGT
Thr
>WENV170022568
BCQK01021399
147089
Alphaproteobacteria
ACG
Arg
>WENV170023079
BCQK01121001
147089
Alphaproteobacteria
ACG
Arg
>WENV170022288
BCQK01003987
237489
Alphaproteobacteria
CAT
Met
>WENV170022866
BCQK01064635
241021
Alphaproteobacteria
GGC
Ala
>WENV170022620
BCQK01027050
113700
Alphaproteobacteria
>WENV170022725
BCQK01040412
113700
Alphaproteobacteria
>WENV170023107
BCQK01128559
159305
Alphaproteobacteria
GTC
Asp
>WENV170022449
BCQK01011851
23468
Alphaproteobacteria
GCT
Ser
>WENV170023072
BCQK01117911
23468
Alphaproteobacteria
GCT
Ser
>WENV170022489
BCQK01015548
148353
Alphaproteobacteria
CAT
Met
>WENV170022177
BCQK01001230
338282
Alphaproteobacteria
GTT
Asn
>WENV170022657
BCQK01031033
338282
Alphaproteobacteria
GTT
Asn
>WENV170023323
BCQK01222589
338282
Alphaproteobacteria
GTT
Asn
>WENV170022539
BCQK01018772
147083
Alphaproteobacteria
GGG
Pro
>WENV170022855
BCQK01061372
147083
Alphaproteobacteria
GGG
Pro
>WENV170022906
BCQK01075263
147083
Alphaproteobacteria
GGG
Pro
>WENV170022974
BCQK01092778
147083
Alphaproteobacteria
GGG
Pro
>WENV170022575
BCQK01022058
82652
Alphaproteobacteria
GTA
Tyr
>WENV170022700
BCQK01037371
339722
Alphaproteobacteria
TTG
Gln
>WENV170022331
BCQK01005809
237740
Alphaproteobacteria
TTT
Lys
>WENV170023326
BCQK01224359
237740
Alphaproteobacteria
TTT
Lys
>WENV170022641
BCQK01029235
80918
Alphaproteobacteria
GAG
Leu
>WENV170022837
BCQK01058527
147334
Alphaproteobacteria
CAT
Met
>WENV170022573
BCQK01021972
236004
Alphaproteobacteria
TTT
Lys
>WENV170023296
BCQK01205914
148158
Alphaproteobacteria
ACG
Arg
>WENV170022326
BCQK01005541
148158
Alphaproteobacteria
ACG
Arg
>WENV170022141
BCQK01000705
252148
Alphaproteobacteria
TGT
Thr
>WENV170022595
BCQK01024073
252148
Alphaproteobacteria
TGT
Thr
>WENV170023056
BCQK01112716
23672
Alphaproteobacteria
GCT
Ser
>WENV170023221
BCQK01165884
23672
Alphaproteobacteria
GCT
Ser
>WENV170022593
BCQK01023967
147878
Alphaproteobacteria
CAT
Met
>WENV170022905
BCQK01075080
167926
Alphaproteobacteria
CAT
Met
>WENV170022794
BCQK01049784
341164
Alphaproteobacteria
GCC
Gly
>WENV170022915
BCQK01076539
59164
Alphaproteobacteria
GAG
Leu
>WENV170022773
BCQK01047430
243837
Alphaproteobacteria
CGT
Thr
>WENV170022294
BCQK01004303
23648
Alphaproteobacteria
CGA
Ser
>WENV170022340
BCQK01006002
338760
Alphaproteobacteria
GAA
Phe
>WENV170023029
BCQK01107479
338760
Alphaproteobacteria
GAA
Phe
>WENV170023080
BCQK01121096
338760
Alphaproteobacteria
GAA
Phe
>WENV170023194
BCQK01154983
338760
Alphaproteobacteria
GAA
Phe
>WENV170023345
BCQK01232132
338760
Alphaproteobacteria
GAA
Phe
>WENV170023050
BCQK01112152
344517
Alphaproteobacteria
GTT
Asn
>WENV170023229
BCQK01169997
344517
Alphaproteobacteria
GTT
Asn
>WENV170022918
BCQK01076724
349650
Alphaproteobacteria
CAC
Val
>WENV170023266
BCQK01190364
349650
Alphaproteobacteria
CAC
Val
>WENV170023067
BCQK01116098
152248
Alphaproteobacteria
TGG
Pro
>WENV170022559
BCQK01020297
339606
Alphaproteobacteria
>WENV170022765
BCQK01046307
412424
Alphaproteobacteria
TCC
Gly
>WENV170022993
BCQK01096792
412424
Alphaproteobacteria
TCC
Gly
>WENV170022731
BCQK01041467
236256
Alphaproteobacteria
TAC
Val
>WENV170022933
BCQK01080634
236256
Alphaproteobacteria
TAC
Val
>WENV170023024
BCQK01105294
236256
Alphaproteobacteria
TAC
Val
>WENV170022740
BCQK01043361
147286
Alphaproteobacteria
CGG
Pro
>WENV170022737
BCQK01042992
147088
Alphaproteobacteria
CCT
Arg
>WENV170023325
BCQK01223053
147088
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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