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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
142 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170027137
CDTY01019424
24650
Bacillota
TAA
Leu
>WENV170026627
CDTY01000890
196621
Bacillota
GTC
Asp
>WENV170026688
CDTY01003608
196621
Bacillota
GTC
Asp
>WENV170026851
CDTY01009229
196621
Bacillota
GTC
Asp
>WENV170026959
CDTY01013192
196621
Bacillota
GTC
Asp
>WENV170027711
CDTY01042284
196621
Bacillota
GTC
Asp
>WENV170026752
CDTY01006221
202812
Bacillota
CAT
Met
>WENV170027629
CDTY01040393
202812
Bacillota
CAT
Met
>WENV170026695
CDTY01003609
309417
Bacillota
GGC
Ala
>WENV170027756
CDTY01044096
309417
Bacillota
GGC
Ala
>WENV170027774
CDTY01044639
309417
Bacillota
GGC
Ala
>WENV170027783
CDTY01045367
309417
Bacillota
GGC
Ala
>WENV170027868
CDTY01048659
309417
Bacillota
GGC
Ala
>WENV170027463
CDTY01031916
144612
Bacillota
TCT
Arg
>WENV170027563
CDTY01036982
144612
Bacillota
TCT
Arg
>WENV170027826
CDTY01046767
144612
Bacillota
TCT
Arg
>WENV170026614
CDTY01000866
235098
Bacillota
GAC
Val
>WENV170027020
CDTY01015549
235098
Bacillota
GAC
Val
>WENV170027888
CDTY01049216
235098
Bacillota
GAC
Val
>WENV170027932
CDTY01051022
235098
Bacillota
GAC
Val
>WENV170026658
CDTY01002249
338152
Bacillota
TTC
Glu
>WENV170026774
CDTY01006613
44854
Bacillota
TGA
Ser
>WENV170027871
CDTY01048772
44854
Bacillota
TGA
Ser
>WENV170027921
CDTY01050221
44854
Bacillota
TGA
Ser
>WENV170026626
CDTY01000890
304022
Bacillota
GCC
Gly
>WENV170026686
CDTY01003608
304022
Bacillota
GCC
Gly
>WENV170026690
CDTY01003608
304022
Bacillota
GCC
Gly
>WENV170027172
CDTY01021056
304022
Bacillota
GCC
Gly
>WENV170027185
CDTY01021381
304022
Bacillota
GCC
Gly
>WENV170027564
CDTY01037015
304022
Bacillota
GCC
Gly
>WENV170027576
CDTY01037785
304022
Bacillota
GCC
Gly
>WENV170027710
CDTY01042284
304022
Bacillota
GCC
Gly
>WENV170027712
CDTY01042284
304022
Bacillota
GCC
Gly
>WENV170026838
CDTY01008931
429443
Bacillota
GCA
Cys
>WENV170026769
CDTY01006239
238910
Bacillota
CTT
Lys
>WENV170027419
CDTY01030413
243227
Bacillota
GTT
Asn
>WENV170027554
CDTY01036095
243227
Bacillota
GTT
Asn
>WENV170026624
CDTY01000890
11034
Bacillota
GGA
Ser
>WENV170026870
CDTY01009868
11034
Bacillota
GGA
Ser
>WENV170026687
CDTY01003608
235117
Bacillota
TAC
Val
>WENV170027173
CDTY01021056
235117
Bacillota
TAC
Val
>WENV170027383
CDTY01028870
274189
Bacillota
TGT
Thr
>WENV170026625
CDTY01000890
235079
Bacillota
GAA
Phe
>WENV170026689
CDTY01003608
235079
Bacillota
GAA
Phe
>WENV170027184
CDTY01021381
235079
Bacillota
GAA
Phe
>WENV170027709
CDTY01042284
235079
Bacillota
GAA
Phe
>WENV170027832
CDTY01047063
235079
Bacillota
GAA
Phe
>WENV170027667
CDTY01041333
173314
Bacillota
GAT
Ile
>WENV170026684
CDTY01003574
338149
Bacillota
CTC
Glu
>WENV170026817
CDTY01007684
338149
Bacillota
CTC
Glu
>WENV170027227
CDTY01023286
338149
Bacillota
CTC
Glu
>WENV170027836
CDTY01047105
338149
Bacillota
CTC
Glu
>WENV170027859
CDTY01048284
338149
Bacillota
CTC
Glu
>WENV170027873
CDTY01048772
338149
Bacillota
CTC
Glu
>WENV170026718
CDTY01005290
245298
Bacillota
CGG
Pro
>WENV170026886
CDTY01010663
245298
Bacillota
CGG
Pro
>WENV170027863
CDTY01048315
245298
Bacillota
CGG
Pro
>WENV170027842
CDTY01047452
287000
Bacillota
GTT
Asn
>WENV170027437
CDTY01031124
169968
Bacillota
CAT
Met
>WENV170027278
CDTY01025026
413152
Bacillota
TCC
Gly
>WENV170027815
CDTY01046534
413152
Bacillota
TCC
Gly
>WENV170027934
CDTY01051294
413152
Bacillota
TCC
Gly
>WENV170027352
CDTY01028331
201704
Bacillota
GAT
Ile
>WENV170027750
CDTY01044066
201704
Bacillota
GAT
Ile
>WENV170027275
CDTY01025000
144610
Bacillota
GTG
His
>WENV170026717
CDTY01005290
411547
Bacillota
CTG
Gln
>WENV170026818
CDTY01008035
411547
Bacillota
CTG
Gln
>WENV170026853
CDTY01009237
411547
Bacillota
CTG
Gln
>WENV170026885
CDTY01010663
411547
Bacillota
CTG
Gln
>WENV170026977
CDTY01014179
411547
Bacillota
CTG
Gln
>WENV170027174
CDTY01021068
411547
Bacillota
CTG
Gln
>WENV170027267
CDTY01024602
411547
Bacillota
CTG
Gln
>WENV170027862
CDTY01048315
411547
Bacillota
CTG
Gln
>WENV170027287
CDTY01025407
4624
Bacillota
GCT
Ser
>WENV170027872
CDTY01048772
4624
Bacillota
GCT
Ser
>WENV170026700
CDTY01004021
235095
Bacillota
GGT
Thr
>WENV170026852
CDTY01009229
235095
Bacillota
GGT
Thr
>WENV170026960
CDTY01013192
235095
Bacillota
GGT
Thr
>WENV170026961
CDTY01013192
235095
Bacillota
GGT
Thr
>WENV170027156
CDTY01019941
235095
Bacillota
GGT
Thr
>WENV170027694
CDTY01041787
419639
Bacillota
GCA
Cys
>WENV170026605
CDTY01000152
411549
Bacillota
TTG
Gln
>WENV170026957
CDTY01013150
411549
Bacillota
TTG
Gln
>WENV170027784
CDTY01045367
411549
Bacillota
TTG
Gln
>WENV170027745
CDTY01043635
245386
Bacillota
CCA
Trp
>WENV170026604
CDTY01000048
148188
Bacillota
CCG
Arg
>WENV170028026
CDTY01054318
148188
Bacillota
CCG
Arg
>WENV170026693
CDTY01003609
80612
Bacillota
GTA
Tyr
>WENV170027404
CDTY01030167
80612
Bacillota
GTA
Tyr
>WENV170027551
CDTY01035769
80612
Bacillota
GTA
Tyr
>WENV170027659
CDTY01040833
235124
Bacillota
TGG
Pro
>WENV170027861
CDTY01048315
235124
Bacillota
TGG
Pro
>WENV170026692
CDTY01003609
338129
Bacillota
TGT
Thr
>WENV170027550
CDTY01035769
338129
Bacillota
TGT
Thr
>WENV170027622
CDTY01039657
338129
Bacillota
TGT
Thr
>WENV170027169
CDTY01020751
157838
Bacillota
GTC
Asp
>WENV170027908
CDTY01050046
157838
Bacillota
GTC
Asp
>WENV170026602
CDTY01000048
144583
Bacillota
ACG
Arg
>WENV170026682
CDTY01003564
144583
Bacillota
ACG
Arg
>WENV170027340
CDTY01027914
144583
Bacillota
ACG
Arg
>WENV170027483
CDTY01032757
144583
Bacillota
ACG
Arg
>WENV170026980
CDTY01014528
144652
Bacillota
GTC
Asp
>WENV170027433
CDTY01031124
144652
Bacillota
GTC
Asp
>WENV170026958
CDTY01013192
235171
Bacillota
CCA
Trp
>WENV170026694
CDTY01003609
144621
Bacillota
GTT
Asn
>WENV170026701
CDTY01004042
144621
Bacillota
GTT
Asn
>WENV170027228
CDTY01023286
144621
Bacillota
GTT
Asn
>WENV170027837
CDTY01047105
144621
Bacillota
GTT
Asn
>WENV170027874
CDTY01048772
144621
Bacillota
GTT
Asn
>WENV170028053
CDTY01055381
144621
Bacillota
GTT
Asn
>WENV170026633
CDTY01001339
277200
Bacillota
GGC
Ala
>WENV170027105
CDTY01018560
243098
Bacillota
GGT
Thr
>WENV170026861
CDTY01009371
58712
Bacillota
CAG
Leu
>WENV170027403
CDTY01030167
58712
Bacillota
CAG
Leu
>WENV170027828
CDTY01046767
58712
Bacillota
CAG
Leu
>WENV170026691
CDTY01003608
245296
Bacillota
CCC
Gly
>WENV170026923
CDTY01012396
245296
Bacillota
CCC
Gly
>WENV170027753
CDTY01044083
245296
Bacillota
CCC
Gly
>WENV170026685
CDTY01003574
272992
Bacillota
CTT
Lys
>WENV170026792
CDTY01007032
272992
Bacillota
CTT
Lys
>WENV170027191
CDTY01021905
272992
Bacillota
CTT
Lys
>WENV170027860
CDTY01048284
272992
Bacillota
CTT
Lys
>WENV170027313
CDTY01026974
344240
Bacillota
GCC
Gly
>WENV170027688
CDTY01041787
344240
Bacillota
GCC
Gly
>WENV170027693
CDTY01041787
344240
Bacillota
GCC
Gly
>WENV170027687
CDTY01041787
196632
Bacillota
GTC
Asp
>WENV170027691
CDTY01041787
196632
Bacillota
GTC
Asp
>WENV170027766
CDTY01044178
196632
Bacillota
GTC
Asp
>WENV170026712
CDTY01004512
248965
Bacillota
GCC
Gly
>WENV170027505
CDTY01033735
248965
Bacillota
GCC
Gly
>WENV170027241
CDTY01023774
144594
Bacillota
CAC
Val
>WENV170027620
CDTY01039420
144594
Bacillota
CAC
Val
>WENV170027887
CDTY01049216
144594
Bacillota
CAC
Val
>WENV170027270
CDTY01024646
272488
Bacillota
GAA
Phe
>WENV170027438
CDTY01031124
272488
Bacillota
GAA
Phe
>WENV170028052
CDTY01055358
272488
Bacillota
GAA
Phe
>WENV170026601
CDTY01000048
338128
Bacillota
TTC
Glu
>WENV170026753
CDTY01006221
338128
Bacillota
TTC
Glu
>WENV170026954
CDTY01012962
338128
Bacillota
TTC
Glu
>WENV170027630
CDTY01040393
338128
Bacillota
TTC
Glu
>WENV170027692
CDTY01041787
245344
Bacillota
GAA
Phe
>WENV170027767
CDTY01044178
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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