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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
177 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170026706
CDTY01004058
235097
Bacteroidota
TTT
Lys
>WENV170027621
CDTY01039644
235097
Bacteroidota
TTT
Lys
>WENV170027625
CDTY01040057
235097
Bacteroidota
TTT
Lys
>WENV170027740
CDTY01043596
235097
Bacteroidota
TTT
Lys
>WENV170027897
CDTY01049624
235097
Bacteroidota
TTT
Lys
>WENV170027845
CDTY01047468
235102
Bacteroidota
CGT
Thr
>WENV170027341
CDTY01027918
267954
Bacteroidota
GCC
Gly
>WENV170027040
CDTY01016864
144657
Bacteroidota
CGG
Pro
>WENV170027852
CDTY01047960
144657
Bacteroidota
CGG
Pro
>WENV170027787
CDTY01045368
243025
Bacteroidota
CAT
Met
>WENV170027998
CDTY01053234
243025
Bacteroidota
CAT
Met
>WENV170026745
CDTY01005792
338155
Bacteroidota
CTC
Glu
>WENV170026840
CDTY01008933
338155
Bacteroidota
CTC
Glu
>WENV170027047
CDTY01017248
338155
Bacteroidota
CTC
Glu
>WENV170027322
CDTY01027388
153993
Bacteroidota
GAT
Ile
>WENV170027382
CDTY01028851
58715
Bacteroidota
GAG
Leu
>WENV170027083
CDTY01017726
46165
Bacteroidota
TGA
Ser
>WENV170027525
CDTY01035014
46165
Bacteroidota
TGA
Ser
>WENV170027084
CDTY01017726
17323
Bacteroidota
GGA
Ser
>WENV170026985
CDTY01014599
338486
Bacteroidota
CAT
Met
>WENV170027148
CDTY01019880
338486
Bacteroidota
CAT
Met
>WENV170027876
CDTY01048776
338486
Bacteroidota
CAT
Met
>WENV170026804
CDTY01007599
415410
Bacteroidota
TTG
Gln
>WENV170026807
CDTY01007607
415410
Bacteroidota
TTG
Gln
>WENV170027171
CDTY01020757
415410
Bacteroidota
TTG
Gln
>WENV170027338
CDTY01027905
415410
Bacteroidota
TTG
Gln
>WENV170027345
CDTY01027945
415410
Bacteroidota
TTG
Gln
>WENV170027573
CDTY01037433
415410
Bacteroidota
TTG
Gln
>WENV170027668
CDTY01041358
415410
Bacteroidota
TTG
Gln
>WENV170026986
CDTY01014603
136244
Bacteroidota
TAC
Val
>WENV170026987
CDTY01014603
136244
Bacteroidota
TAC
Val
>WENV170027729
CDTY01043110
136244
Bacteroidota
TAC
Val
>WENV170027730
CDTY01043110
136244
Bacteroidota
TAC
Val
>WENV170027587
CDTY01038305
20893
Bacteroidota
GGA
Ser
>WENV170027754
CDTY01044084
237247
Bacteroidota
TTT
Lys
>WENV170027236
CDTY01023676
155123
Bacteroidota
GTT
Asn
>WENV170027237
CDTY01023676
155123
Bacteroidota
GTT
Asn
>WENV170027085
CDTY01017726
344692
Bacteroidota
GGT
Thr
>WENV170027539
CDTY01035760
145504
Bacteroidota
TGT
Thr
>WENV170027021
CDTY01015672
235182
Bacteroidota
>WENV170027503
CDTY01033696
235182
Bacteroidota
>WENV170028004
CDTY01053581
272983
Bacteroidota
CGT
Thr
>WENV170027664
CDTY01040936
338124
Bacteroidota
CCG
Arg
>WENV170027518
CDTY01034510
238121
Bacteroidota
CTT
Lys
>WENV170027519
CDTY01034510
238121
Bacteroidota
CTT
Lys
>WENV170027520
CDTY01034510
238121
Bacteroidota
CTT
Lys
>WENV170027760
CDTY01044117
126641
Bacteroidota
TAC
Val
>WENV170027761
CDTY01044117
126641
Bacteroidota
TAC
Val
>WENV170027917
CDTY01050055
126641
Bacteroidota
TAC
Val
>WENV170026741
CDTY01005757
338132
Bacteroidota
GCA
Cys
>WENV170026953
CDTY01012895
338132
Bacteroidota
GCA
Cys
>WENV170027037
CDTY01016758
338132
Bacteroidota
GCA
Cys
>WENV170027116
CDTY01019001
338132
Bacteroidota
GCA
Cys
>WENV170027117
CDTY01019001
338132
Bacteroidota
GCA
Cys
>WENV170027224
CDTY01023284
338132
Bacteroidota
GCA
Cys
>WENV170027399
CDTY01029722
338132
Bacteroidota
GCA
Cys
>WENV170027494
CDTY01033662
338132
Bacteroidota
GCA
Cys
>WENV170027610
CDTY01038801
338132
Bacteroidota
GCA
Cys
>WENV170027806
CDTY01045705
338132
Bacteroidota
GCA
Cys
>WENV170027846
CDTY01047479
338132
Bacteroidota
GCA
Cys
>WENV170027369
CDTY01028783
193809
Bacteroidota
CAT
Met
>WENV170027357
CDTY01028355
46489
Bacteroidota
TGA
Ser
>WENV170027855
CDTY01047981
235165
Bacteroidota
CCA
Trp
>WENV170027880
CDTY01048927
235165
Bacteroidota
CCA
Trp
>WENV170026613
CDTY01000829
301449
Bacteroidota
CGG
Pro
>WENV170026732
CDTY01005661
301449
Bacteroidota
CGG
Pro
>WENV170026831
CDTY01008540
301449
Bacteroidota
CGG
Pro
>WENV170026882
CDTY01010658
301449
Bacteroidota
CGG
Pro
>WENV170027246
CDTY01024033
301449
Bacteroidota
CGG
Pro
>WENV170027284
CDTY01025039
301449
Bacteroidota
CGG
Pro
>WENV170027797
CDTY01045695
301449
Bacteroidota
CGG
Pro
>WENV170027866
CDTY01048329
301449
Bacteroidota
CGG
Pro
>WENV170027834
CDTY01047079
144933
Bacteroidota
TCT
Arg
>WENV170027835
CDTY01047104
144933
Bacteroidota
TCT
Arg
>WENV170027890
CDTY01049235
144933
Bacteroidota
TCT
Arg
>WENV170026646
CDTY01001852
303954
Bacteroidota
GCC
Gly
>WENV170028048
CDTY01055004
303954
Bacteroidota
GCC
Gly
>WENV170027600
CDTY01038773
144656
Bacteroidota
GTG
His
>WENV170027586
CDTY01038300
235207
Bacteroidota
CAT
Met
>WENV170027898
CDTY01049632
235207
Bacteroidota
CAT
Met
>WENV170027985
CDTY01052771
235207
Bacteroidota
CAT
Met
>WENV170027986
CDTY01052771
235207
Bacteroidota
CAT
Met
>WENV170027087
CDTY01017749
235180
Bacteroidota
CCA
Trp
>WENV170026644
CDTY01001813
144596
Bacteroidota
GGC
Ala
>WENV170027360
CDTY01028363
80607
Bacteroidota
GTA
Tyr
>WENV170027487
CDTY01033208
80607
Bacteroidota
GTA
Tyr
>WENV170027492
CDTY01033660
80607
Bacteroidota
GTA
Tyr
>WENV170028030
CDTY01054516
80607
Bacteroidota
GTA
Tyr
>WENV170027351
CDTY01028306
80607
Bacteroidota
GTA
Tyr
>WENV170026946
CDTY01012881
113604
Bacteroidota
>WENV170026949
CDTY01012881
113604
Bacteroidota
>WENV170027059
CDTY01017697
113604
Bacteroidota
>WENV170027062
CDTY01017697
113604
Bacteroidota
>WENV170027065
CDTY01017697
113604
Bacteroidota
>WENV170027067
CDTY01017697
113604
Bacteroidota
>WENV170027972
CDTY01052708
113604
Bacteroidota
>WENV170027975
CDTY01052708
113604
Bacteroidota
>WENV170027978
CDTY01052708
113604
Bacteroidota
>WENV170027980
CDTY01052708
113604
Bacteroidota
>WENV170026824
CDTY01008448
16999
Bacteroidota
GGA
Ser
>WENV170027663
CDTY01040920
80614
Bacteroidota
>WENV170027850
CDTY01047493
80614
Bacteroidota
>WENV170027875
CDTY01048773
80614
Bacteroidota
>WENV170027951
CDTY01051664
80614
Bacteroidota
>WENV170026599
CDTY01000023
52358
Bacteroidota
TGA
Ser
>WENV170026828
CDTY01008473
52358
Bacteroidota
TGA
Ser
>WENV170026875
CDTY01010253
52358
Bacteroidota
TGA
Ser
>WENV170026942
CDTY01012859
52358
Bacteroidota
TGA
Ser
>WENV170026943
CDTY01012859
52358
Bacteroidota
TGA
Ser
>WENV170027057
CDTY01017697
52358
Bacteroidota
TGA
Ser
>WENV170027507
CDTY01034081
52358
Bacteroidota
TGA
Ser
>WENV170027599
CDTY01038773
52358
Bacteroidota
TGA
Ser
>WENV170027948
CDTY01051530
52358
Bacteroidota
TGA
Ser
>WENV170028045
CDTY01054987
52358
Bacteroidota
TGA
Ser
>WENV170027596
CDTY01038684
154643
Bacteroidota
CAT
Met
>WENV170027676
CDTY01041361
154643
Bacteroidota
CAT
Met
>WENV170027363
CDTY01028363
144590
Bacteroidota
GTT
Asn
>WENV170027364
CDTY01028363
144590
Bacteroidota
GTT
Asn
>WENV170027365
CDTY01028363
144590
Bacteroidota
GTT
Asn
>WENV170027368
CDTY01028779
95559
Bacteroidota
TAG
Leu
>WENV170026865
CDTY01009807
419272
Bacteroidota
CTG
Gln
>WENV170027306
CDTY01026106
419272
Bacteroidota
CTG
Gln
>WENV170027501
CDTY01033681
144655
Bacteroidota
GGC
Ala
>WENV170027181
CDTY01021193
144639
Bacteroidota
GGC
Ala
>WENV170027472
CDTY01032660
338164
Bacteroidota
TTC
Glu
>WENV170027304
CDTY01026046
338164
Bacteroidota
TTC
Glu
>WENV170027471
CDTY01032660
338164
Bacteroidota
TTC
Glu
>WENV170028047
CDTY01054992
95875
Bacteroidota
TAG
Leu
>WENV170027776
CDTY01044953
151121
Bacteroidota
CAT
Met
>WENV170026755
CDTY01006223
240012
Bacteroidota
CCC
Gly
>WENV170026904
CDTY01011118
44852
Bacteroidota
TAA
Leu
>WENV170027557
CDTY01036158
44852
Bacteroidota
TAA
Leu
>WENV170027913
CDTY01050052
44852
Bacteroidota
TAA
Leu
>WENV170027094
CDTY01018220
280513
Bacteroidota
TTT
Lys
>WENV170026798
CDTY01007152
150485
Bacteroidota
GTT
Asn
>WENV170026799
CDTY01007152
150485
Bacteroidota
GTT
Asn
>WENV170026800
CDTY01007152
150485
Bacteroidota
GTT
Asn
>WENV170026801
CDTY01007152
150485
Bacteroidota
GTT
Asn
>WENV170026802
CDTY01007152
150485
Bacteroidota
GTT
Asn
>WENV170026983
CDTY01014597
150485
Bacteroidota
GTT
Asn
>WENV170026984
CDTY01014597
150485
Bacteroidota
GTT
Asn
>WENV170027775
CDTY01044949
150485
Bacteroidota
GTT
Asn
>WENV170027559
CDTY01036194
19528
Bacteroidota
GGA
Ser
>WENV170026864
CDTY01009807
132360
Bacteroidota
GGG
Pro
>WENV170027028
CDTY01016361
132360
Bacteroidota
GGG
Pro
>WENV170027252
CDTY01024134
132360
Bacteroidota
GGG
Pro
>WENV170027348
CDTY01028047
132360
Bacteroidota
GGG
Pro
>WENV170027967
CDTY01052316
132360
Bacteroidota
GGG
Pro
>WENV170026833
CDTY01008823
425638
Bacteroidota
CTG
Gln
>WENV170026915
CDTY01011638
425638
Bacteroidota
CTG
Gln
>WENV170027035
CDTY01016394
425638
Bacteroidota
CTG
Gln
>WENV170027288
CDTY01025449
425638
Bacteroidota
CTG
Gln
>WENV170027390
CDTY01029264
425638
Bacteroidota
CTG
Gln
>WENV170027853
CDTY01047965
425638
Bacteroidota
CTG
Gln
>WENV170027870
CDTY01048725
425638
Bacteroidota
CTG
Gln
>WENV170027822
CDTY01046613
19317
Bacteroidota
GGA
Ser
>WENV170026708
CDTY01004412
353927
Bacteroidota
TTC
Glu
>WENV170026826
CDTY01008466
353927
Bacteroidota
TTC
Glu
>WENV170027681
CDTY01041361
353927
Bacteroidota
TTC
Glu
>WENV170027824
CDTY01046720
353927
Bacteroidota
TTC
Glu
>WENV170027163
CDTY01020303
185921
Bacteroidota
GTC
Asp
>WENV170027328
CDTY01027836
146530
Bacteroidota
TGT
Thr
>WENV170026839
CDTY01008933
23696
Bacteroidota
GCT
Ser
>WENV170027017
CDTY01015534
414426
Bacteroidota
CTG
Gln
>WENV170027601
CDTY01038773
16224
Bacteroidota
GGA
Ser
>WENV170026597
CDTY01000016
151960
Bacteroidota
GGC
Ala
>WENV170027289
CDTY01025450
151960
Bacteroidota
GGC
Ala
>WENV170026866
CDTY01009807
16220
Bacteroidota
GGA
Ser
>WENV170026770
CDTY01006242
338125
Bacteroidota
CCT
Arg
>WENV170026777
CDTY01006683
235129
Bacteroidota
GCC
Gly
>WENV170026779
CDTY01006683
235129
Bacteroidota
GCC
Gly
>WENV170026940
CDTY01012855
235129
Bacteroidota
GCC
Gly
>WENV170027265
CDTY01024592
235129
Bacteroidota
GCC
Gly
>WENV170027380
CDTY01028851
235129
Bacteroidota
GCC
Gly
>WENV170027527
CDTY01035244
411629
Bacteroidota
TTG
Gln
>WENV170027790
CDTY01045535
411629
Bacteroidota
TTG
Gln
>WENV170028022
CDTY01054072
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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