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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
66 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170029534
CDYG01022644
235097
Bacteroidota
TTT
Lys
>WENV170029585
CDYG01026592
235097
Bacteroidota
TTT
Lys
>WENV170029302
CDYG01001360
235102
Bacteroidota
CGT
Thr
>WENV170029519
CDYG01020444
235102
Bacteroidota
CGT
Thr
>WENV170029465
CDYG01015058
243025
Bacteroidota
CAT
Met
>WENV170029512
CDYG01019762
243025
Bacteroidota
CAT
Met
>WENV170029543
CDYG01023388
243025
Bacteroidota
CAT
Met
>WENV170029601
CDYG01028281
243025
Bacteroidota
CAT
Met
>WENV170029633
CDYG01031807
243025
Bacteroidota
CAT
Met
>WENV170029721
CDYG01038996
243025
Bacteroidota
CAT
Met
>WENV170029453
CDYG01014134
17323
Bacteroidota
GGA
Ser
>WENV170029334
CDYG01003624
338486
Bacteroidota
CAT
Met
>WENV170029629
CDYG01031221
338486
Bacteroidota
CAT
Met
>WENV170029607
CDYG01028965
415410
Bacteroidota
TTG
Gln
>WENV170029521
CDYG01020808
415410
Bacteroidota
TTG
Gln
>WENV170029593
CDYG01027422
415410
Bacteroidota
TTG
Gln
>WENV170029517
CDYG01020208
59689
Bacteroidota
CAG
Leu
>WENV170029464
CDYG01014995
344692
Bacteroidota
GGT
Thr
>WENV170029306
CDYG01001768
338124
Bacteroidota
CCG
Arg
>WENV170029670
CDYG01035223
338124
Bacteroidota
CCG
Arg
>WENV170029297
CDYG01001064
338132
Bacteroidota
GCA
Cys
>WENV170029693
CDYG01037213
338132
Bacteroidota
GCA
Cys
>WENV170029655
CDYG01033792
193809
Bacteroidota
CAT
Met
>WENV170029656
CDYG01033792
193809
Bacteroidota
CAT
Met
>WENV170029384
CDYG01008662
301449
Bacteroidota
CGG
Pro
>WENV170029555
CDYG01024026
301449
Bacteroidota
CGG
Pro
>WENV170029619
CDYG01029369
301449
Bacteroidota
CGG
Pro
>WENV170029768
CDYG01043568
144656
Bacteroidota
GTG
His
>WENV170029618
CDYG01029367
235207
Bacteroidota
CAT
Met
>WENV170029440
CDYG01013017
80607
Bacteroidota
GTA
Tyr
>WENV170029566
CDYG01024761
80607
Bacteroidota
GTA
Tyr
>WENV170029697
CDYG01037383
80607
Bacteroidota
GTA
Tyr
>WENV170029379
CDYG01008327
113604
Bacteroidota
>WENV170029382
CDYG01008327
113604
Bacteroidota
>WENV170029475
CDYG01016725
113604
Bacteroidota
>WENV170029478
CDYG01016725
113604
Bacteroidota
>WENV170029776
CDYG01044205
113604
Bacteroidota
>WENV170029779
CDYG01044205
113604
Bacteroidota
>WENV170029293
CDYG01000730
52358
Bacteroidota
TGA
Ser
>WENV170029337
CDYG01004348
52358
Bacteroidota
TGA
Ser
>WENV170029461
CDYG01014551
52358
Bacteroidota
TGA
Ser
>WENV170029523
CDYG01021499
52358
Bacteroidota
TGA
Ser
>WENV170029675
CDYG01035970
52358
Bacteroidota
TGA
Ser
>WENV170029516
CDYG01020138
154643
Bacteroidota
CAT
Met
>WENV170029719
CDYG01038896
154643
Bacteroidota
CAT
Met
>WENV170029561
CDYG01024761
144590
Bacteroidota
GTT
Asn
>WENV170029562
CDYG01024761
144590
Bacteroidota
GTT
Asn
>WENV170029292
CDYG01000728
95559
Bacteroidota
TAG
Leu
>WENV170029299
CDYG01001066
419272
Bacteroidota
CTG
Gln
>WENV170029615
CDYG01029329
144655
Bacteroidota
GGC
Ala
>WENV170029564
CDYG01024761
44852
Bacteroidota
TAA
Leu
>WENV170029624
CDYG01030076
44852
Bacteroidota
TAA
Leu
>WENV170029318
CDYG01003053
411550
Bacteroidota
CTG
Gln
>WENV170029294
CDYG01000731
132360
Bacteroidota
GGG
Pro
>WENV170029578
CDYG01025503
132360
Bacteroidota
GGG
Pro
>WENV170029470
CDYG01016360
425638
Bacteroidota
CTG
Gln
>WENV170029542
CDYG01023192
425638
Bacteroidota
CTG
Gln
>WENV170029717
CDYG01038488
425638
Bacteroidota
CTG
Gln
>WENV170029797
CDYG01045278
19317
Bacteroidota
GGA
Ser
>WENV170029785
CDYG01044524
353927
Bacteroidota
TTC
Glu
>WENV170029304
CDYG01001419
414426
Bacteroidota
CTG
Gln
>WENV170029723
CDYG01039229
16224
Bacteroidota
GGA
Ser
>WENV170029769
CDYG01043568
16224
Bacteroidota
GGA
Ser
>WENV170029300
CDYG01001066
16220
Bacteroidota
GGA
Ser
>WENV170029608
CDYG01028991
338125
Bacteroidota
CCT
Arg
>WENV170029640
CDYG01032347
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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