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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170031407
CDYI01053478
235146
Actinomycetota
CGT
Thr
>WENV170031094
CDYI01040183
235194
Actinomycetota
GTG
His
>WENV170030207
CDYI01003859
158720
Actinomycetota
ACG
Arg
>WENV170030208
CDYI01003859
158720
Actinomycetota
ACG
Arg
>WENV170030145
CDYI01000821
411601
Actinomycetota
CCC
Gly
>WENV170031229
CDYI01046439
23370
Actinomycetota
GCT
Ser
>WENV170030808
CDYI01029369
174149
Actinomycetota
GAT
Ile
>WENV170030809
CDYI01029369
235174
Actinomycetota
TGC
Ala
>WENV170030753
CDYI01026805
121510
Actinomycetota
TAA
Leu
>WENV170031411
CDYI01053666
44855
Actinomycetota
TGA
Ser
>WENV170030910
CDYI01033007
235199
Actinomycetota
CAC
Val
>WENV170030980
CDYI01036060
235199
Actinomycetota
CAC
Val
>WENV170030768
CDYI01027916
313386
Actinomycetota
CGT
Thr
>WENV170030219
CDYI01004211
413665
Actinomycetota
TTG
Gln
>WENV170030143
CDYI01000565
254857
Actinomycetota
CCG
Arg
>WENV170031495
CDYI01058499
295695
Actinomycetota
CTC
Glu
>WENV170031496
CDYI01058499
338148
Actinomycetota
CTG
Gln
>WENV170030504
CDYI01015915
53078
Actinomycetota
GGA
Ser
>WENV170030687
CDYI01024062
144825
Actinomycetota
CAT
Met
>WENV170030919
CDYI01033166
235348
Actinomycetota
CCT
Arg
>WENV170030769
CDYI01027916
113601
Actinomycetota
TAG
Leu
>WENV170031089
CDYI01039729
144595
Actinomycetota
CAA
Leu
>WENV170031408
CDYI01053493
163764
Actinomycetota
TGG
Pro
>WENV170030951
CDYI01034689
80622
Actinomycetota
CAG
Leu
>WENV170031482
CDYI01057619
16222
Actinomycetota
GAG
Leu
>WENV170031054
CDYI01038332
144660
Actinomycetota
TAC
Val
>WENV170031311
CDYI01050093
95593
Actinomycetota
>WENV170030761
CDYI01027354
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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